RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZPR1O75312 459 aa22.39■■□□□ 1.17
SSH1-208ENST00000548522 NFIXQ14938 502 aa22.39■■□□□ 1.17
SSH1-208ENST00000548522 HTRA3P83110 453 aa22.38■■□□□ 1.17
SSH1-208ENST00000548522 DNAJC5GQ8N7S2 189 aa22.38■■□□□ 1.17
SSH1-208ENST00000548522 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
SSH1-208ENST00000548522 BCL2L12Q9HB09 334 aa22.38■■□□□ 1.17
SSH1-208ENST00000548522 RASSF7Q02833 373 aa22.37■■□□□ 1.17
SSH1-208ENST00000548522 CARMIL3Q8ND23 1372 aa22.37■■□□□ 1.17
SSH1-208ENST00000548522 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
SSH1-208ENST00000548522 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
SSH1-208ENST00000548522 PCNTO95613 3336 aa22.35■■□□□ 1.17
SSH1-208ENST00000548522 RBM46Q8TBY0 533 aaKnown RBP22.35■■□□□ 1.17
SSH1-208ENST00000548522 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
SSH1-208ENST00000548522 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
SSH1-208ENST00000548522 PRELPP51888 382 aa22.34■■□□□ 1.17
SSH1-208ENST00000548522 WDR90Q96KV7 1748 aa22.34■■□□□ 1.17
SSH1-208ENST00000548522 COL3A1P02461 1466 aaPredicted RBP22.34■■□□□ 1.17
SSH1-208ENST00000548522 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
SSH1-208ENST00000548522 UBR2Q8IWV8 1755 aa22.33■■□□□ 1.17
SSH1-208ENST00000548522 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.17
SSH1-208ENST00000548522 DIAPH1O60610 1272 aaKnown RBP22.33■■□□□ 1.17
SSH1-208ENST00000548522 CANXP27824 592 aaKnown RBP22.32■■□□□ 1.16
SSH1-208ENST00000548522 C16orf71Q8IYS4 520 aaPredicted RBP22.32■■□□□ 1.16
SSH1-208ENST00000548522 RRAGCQ9HB90 399 aa22.32■■□□□ 1.16
SSH1-208ENST00000548522 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
SSH1-208ENST00000548522 SERPINB2P05120 415 aa22.31■■□□□ 1.16
SSH1-208ENST00000548522 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
SSH1-208ENST00000548522 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
SSH1-208ENST00000548522 SBF1O95248 1867 aa22.29■■□□□ 1.16
SSH1-208ENST00000548522 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
SSH1-208ENST00000548522 DLEC1Q9Y238 1755 aa22.29■■□□□ 1.16
SSH1-208ENST00000548522 TNRC6CQ9HCJ0 1690 aaKnown RBP22.29■■□□□ 1.16
SSH1-208ENST00000548522 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
SSH1-208ENST00000548522 ZNF496Q96IT1 587 aaPredicted RBP22.28■■□□□ 1.16
SSH1-208ENST00000548522 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
SSH1-208ENST00000548522 NFKBIEO00221 500 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 FSTL1Q12841 308 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
SSH1-208ENST00000548522 U2SURPO15042 1029 aaKnown RBP22.25■■□□□ 1.15
SSH1-208ENST00000548522 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
SSH1-208ENST00000548522 TTLL6Q8N841 843 aa22.25■■□□□ 1.15
SSH1-208ENST00000548522 KLRG1Q96E93 195 aa22.25■■□□□ 1.15
SSH1-208ENST00000548522 HEG1Q9ULI3 1381 aa22.25■■□□□ 1.15
SSH1-208ENST00000548522 STARD3NLO95772 234 aa22.24■■□□□ 1.15
SSH1-208ENST00000548522 LMNB1P20700 586 aa22.24■■□□□ 1.15
SSH1-208ENST00000548522 ZNF330Q9Y3S2 320 aaPredicted RBP22.24■■□□□ 1.15
SSH1-208ENST00000548522 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
SSH1-208ENST00000548522 ZNF790Q6PG37 636 aa22.23■■□□□ 1.15
SSH1-208ENST00000548522 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
SSH1-208ENST00000548522 ANKRD31Q8N7Z5 1873 aa22.22■■□□□ 1.15
SSH1-208ENST00000548522 H0YIN7 160 aa22.22■■□□□ 1.15
SSH1-208ENST00000548522 TEFQ10587 303 aa22.22■■□□□ 1.15
SSH1-208ENST00000548522 TBC1D2BQ9UPU7 963 aa22.22■■□□□ 1.15
SSH1-208ENST00000548522 ZC3H4Q9UPT8 1303 aaKnown RBP22.22■■□□□ 1.15
SSH1-208ENST00000548522 SIPA1L3O60292 1781 aaPredicted RBP22.22■■□□□ 1.15
SSH1-208ENST00000548522 GNAT3A8MTJ3 354 aa22.21■■□□□ 1.15
SSH1-208ENST00000548522 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
SSH1-208ENST00000548522 KCNQ3O43525 872 aa22.2■■□□□ 1.14
SSH1-208ENST00000548522 PRR5LQ6MZQ0 368 aa22.2■■□□□ 1.14
SSH1-208ENST00000548522 SMC1BQ8NDV3 1235 aa22.2■■□□□ 1.14
SSH1-208ENST00000548522 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
SSH1-208ENST00000548522 GLTPD2A6NH11 291 aa22.19■■□□□ 1.14
SSH1-208ENST00000548522 A1BGP04217 495 aa22.19■■□□□ 1.14
SSH1-208ENST00000548522 JMYQ8N9B5 988 aa22.19■■□□□ 1.14
SSH1-208ENST00000548522 PHACTR3Q96KR7 559 aa22.19■■□□□ 1.14
SSH1-208ENST00000548522 NPC1L1Q9UHC9 1359 aa22.19■■□□□ 1.14
SSH1-208ENST00000548522 CEMIPQ8WUJ3 1361 aa22.18■■□□□ 1.14
SSH1-208ENST00000548522 A0A087WZG4 1122 aa22.18■■□□□ 1.14
SSH1-208ENST00000548522 ZNF622Q969S3 477 aaKnown RBP eCLIP22.18■■□□□ 1.14
SSH1-208ENST00000548522 C21orf2O43822 256 aa22.17■■□□□ 1.14
SSH1-208ENST00000548522 PIP4K2AP48426 406 aaPredicted RBP22.17■■□□□ 1.14
SSH1-208ENST00000548522 CAMTA2O94983 1202 aa22.16■■□□□ 1.14
SSH1-208ENST00000548522 IL6STP40189 918 aaPredicted RBP22.16■■□□□ 1.14
SSH1-208ENST00000548522 FMNL2Q96PY5 1086 aa22.16■■□□□ 1.14
SSH1-208ENST00000548522 BRIP1Q9BX63 1249 aa22.16■■□□□ 1.14
SSH1-208ENST00000548522 PRAMEF22A3QJZ6 481 aa22.15■■□□□ 1.14
SSH1-208ENST00000548522 POTECB2RU33 542 aa22.15■■□□□ 1.14
SSH1-208ENST00000548522 VEGFAP15692 232 aaPredicted RBP22.15■■□□□ 1.14
SSH1-208ENST00000548522 PRKAR2BP31323 418 aa22.15■■□□□ 1.14
SSH1-208ENST00000548522 COL13A1Q5TAT6 717 aaPredicted RBP22.15■■□□□ 1.14
SSH1-208ENST00000548522 RSPH6AQ9H0K4 717 aa22.15■■□□□ 1.14
SSH1-208ENST00000548522 PDE6BP35913 854 aa22.13■■□□□ 1.13
SSH1-208ENST00000548522 CNBD1Q8NA66 436 aa22.13■■□□□ 1.13
SSH1-208ENST00000548522 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
SSH1-208ENST00000548522 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
SSH1-208ENST00000548522 CCDC88AQ3V6T2 1871 aa22.12■■□□□ 1.13
SSH1-208ENST00000548522 BTBD11A6QL63 1104 aa22.12■■□□□ 1.13
SSH1-208ENST00000548522 USP16Q9Y5T5 823 aa22.11■■□□□ 1.13
SSH1-208ENST00000548522 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
SSH1-208ENST00000548522 FER1L6Q2WGJ9 1857 aa22.1■■□□□ 1.13
SSH1-208ENST00000548522 ERFEQ4G0M1 354 aa22.1■■□□□ 1.13
SSH1-208ENST00000548522 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
SSH1-208ENST00000548522 DZIP3Q86Y13 1208 aaKnown RBP22.1■■□□□ 1.13
SSH1-208ENST00000548522 SETDB2Q96T68 719 aa22.1■■□□□ 1.13
SSH1-208ENST00000548522 MCM10Q7L590 875 aa22.09■■□□□ 1.13
SSH1-208ENST00000548522 SLX4Q8IY92 1834 aa22.08■■□□□ 1.13
SSH1-208ENST00000548522 NPHP1O15259 732 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms