RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 NARFQ9UHQ1 456 aa17.64■□□□□ 0.41
NR4A1-209ENST00000548232 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
NR4A1-209ENST00000548232 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
NR4A1-209ENST00000548232 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
NR4A1-209ENST00000548232 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
NR4A1-209ENST00000548232 SERPINB2P05120 415 aa17.62■□□□□ 0.41
NR4A1-209ENST00000548232 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
NR4A1-209ENST00000548232 RRAGCQ9HB90 399 aa17.62■□□□□ 0.41
NR4A1-209ENST00000548232 STARD3NLO95772 234 aa17.61■□□□□ 0.41
NR4A1-209ENST00000548232 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
NR4A1-209ENST00000548232 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
NR4A1-209ENST00000548232 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
NR4A1-209ENST00000548232 TEFQ10587 303 aa17.6■□□□□ 0.41
NR4A1-209ENST00000548232 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
NR4A1-209ENST00000548232 BCL2L12Q9HB09 334 aa17.6■□□□□ 0.41
NR4A1-209ENST00000548232 COL15A1P39059 1388 aa17.6■□□□□ 0.41
NR4A1-209ENST00000548232 TJP1Q07157 1748 aa17.6■□□□□ 0.41
NR4A1-209ENST00000548232 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
NR4A1-209ENST00000548232 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
NR4A1-209ENST00000548232 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
NR4A1-209ENST00000548232 RASSF7Q02833 373 aa17.58■□□□□ 0.4
NR4A1-209ENST00000548232 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
NR4A1-209ENST00000548232 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
NR4A1-209ENST00000548232 A0A087WZG4 1122 aa17.57■□□□□ 0.4
NR4A1-209ENST00000548232 H0YIN7 160 aa17.57■□□□□ 0.4
NR4A1-209ENST00000548232 DNAJC5GQ8N7S2 189 aa17.57■□□□□ 0.4
NR4A1-209ENST00000548232 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
NR4A1-209ENST00000548232 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
NR4A1-209ENST00000548232 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
NR4A1-209ENST00000548232 HTRA3P83110 453 aa17.56■□□□□ 0.4
NR4A1-209ENST00000548232 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
NR4A1-209ENST00000548232 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
NR4A1-209ENST00000548232 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
NR4A1-209ENST00000548232 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
NR4A1-209ENST00000548232 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
NR4A1-209ENST00000548232 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
NR4A1-209ENST00000548232 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.4
NR4A1-209ENST00000548232 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
NR4A1-209ENST00000548232 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
NR4A1-209ENST00000548232 LMNB1P20700 586 aa17.54■□□□□ 0.4
NR4A1-209ENST00000548232 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
NR4A1-209ENST00000548232 MRC1P22897 1456 aa17.54■□□□□ 0.4
NR4A1-209ENST00000548232 NPHP1O15259 732 aa17.53■□□□□ 0.4
NR4A1-209ENST00000548232 FSTL1Q12841 308 aa17.53■□□□□ 0.4
NR4A1-209ENST00000548232 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.4
NR4A1-209ENST00000548232 A1BGP04217 495 aa17.52■□□□□ 0.4
NR4A1-209ENST00000548232 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
NR4A1-209ENST00000548232 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
NR4A1-209ENST00000548232 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
NR4A1-209ENST00000548232 HEG1Q9ULI3 1381 aa17.52■□□□□ 0.39
NR4A1-209ENST00000548232 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.39
NR4A1-209ENST00000548232 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
NR4A1-209ENST00000548232 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
NR4A1-209ENST00000548232 KCNQ3O43525 872 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 C21orf2O43822 256 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 PDE6BP35913 854 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
NR4A1-209ENST00000548232 PRELPP51888 382 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
NR4A1-209ENST00000548232 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
NR4A1-209ENST00000548232 VEGFAP15692 232 aaPredicted RBP17.49■□□□□ 0.39
NR4A1-209ENST00000548232 SMC1BQ8NDV3 1235 aa17.49■□□□□ 0.39
NR4A1-209ENST00000548232 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
NR4A1-209ENST00000548232 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
NR4A1-209ENST00000548232 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
NR4A1-209ENST00000548232 NFKBIEO00221 500 aa17.47■□□□□ 0.39
NR4A1-209ENST00000548232 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
NR4A1-209ENST00000548232 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
NR4A1-209ENST00000548232 DPY19L2Q6NUT2 758 aa17.47■□□□□ 0.39
NR4A1-209ENST00000548232 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
NR4A1-209ENST00000548232 KLRG1Q96E93 195 aa17.47■□□□□ 0.39
NR4A1-209ENST00000548232 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
NR4A1-209ENST00000548232 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
NR4A1-209ENST00000548232 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
NR4A1-209ENST00000548232 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
NR4A1-209ENST00000548232 MCM10Q7L590 875 aa17.46■□□□□ 0.39
NR4A1-209ENST00000548232 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
NR4A1-209ENST00000548232 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
NR4A1-209ENST00000548232 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
NR4A1-209ENST00000548232 PDZRN3Q9UPQ7 1066 aa17.46■□□□□ 0.39
NR4A1-209ENST00000548232 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
NR4A1-209ENST00000548232 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
NR4A1-209ENST00000548232 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
NR4A1-209ENST00000548232 ST5P78524 1137 aa17.44■□□□□ 0.38
NR4A1-209ENST00000548232 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
NR4A1-209ENST00000548232 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
NR4A1-209ENST00000548232 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
NR4A1-209ENST00000548232 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
NR4A1-209ENST00000548232 SBF1O95248 1867 aa17.42■□□□□ 0.38
NR4A1-209ENST00000548232 NRXN2Q9P2S2 1712 aa17.42■□□□□ 0.38
NR4A1-209ENST00000548232 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
NR4A1-209ENST00000548232 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
NR4A1-209ENST00000548232 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
NR4A1-209ENST00000548232 NBPF5PQ86XG9 351 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-209ENST00000548232 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
NR4A1-209ENST00000548232 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
NR4A1-209ENST00000548232 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms