RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 ALDH1L1O75891 902 aa17.74■□□□□ 0.43
LETMD1-209ENST00000547318 BRD1O95696 1058 aa17.74■□□□□ 0.43
LETMD1-209ENST00000547318 HSPA4P34932 840 aa17.74■□□□□ 0.43
LETMD1-209ENST00000547318 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
LETMD1-209ENST00000547318 ZGPATQ8N5A5 531 aaKnown RBP17.74■□□□□ 0.43
LETMD1-209ENST00000547318 RHPN1Q8TCX5 695 aa17.74■□□□□ 0.43
LETMD1-209ENST00000547318 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-209ENST00000547318 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
LETMD1-209ENST00000547318 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
LETMD1-209ENST00000547318 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
LETMD1-209ENST00000547318 TEFQ10587 303 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 BEND3Q5T5X7 828 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 ERC1Q8IUD2 1116 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 RAD50Q92878 1312 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
LETMD1-209ENST00000547318 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
LETMD1-209ENST00000547318 SYAP1Q96A49 352 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-209ENST00000547318 DBF4Q9UBU7 674 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-209ENST00000547318 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
LETMD1-209ENST00000547318 MST1RQ04912 1400 aa17.71■□□□□ 0.43
LETMD1-209ENST00000547318 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.42
LETMD1-209ENST00000547318 PI4K2BQ8TCG2 481 aa17.71■□□□□ 0.42
LETMD1-209ENST00000547318 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.42
LETMD1-209ENST00000547318 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
LETMD1-209ENST00000547318 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
LETMD1-209ENST00000547318 GLRX3O76003 335 aaKnown RBP17.7■□□□□ 0.42
LETMD1-209ENST00000547318 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
LETMD1-209ENST00000547318 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
LETMD1-209ENST00000547318 ABCC6O95255 1503 aa17.7■□□□□ 0.42
LETMD1-209ENST00000547318 WDR33Q9C0J8 1336 aaKnown RBP17.7■□□□□ 0.42
LETMD1-209ENST00000547318 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-209ENST00000547318 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
LETMD1-209ENST00000547318 SGSM2O43147 1006 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
LETMD1-209ENST00000547318 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 NECTIN2Q92692 538 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
LETMD1-209ENST00000547318 PHF14O94880 888 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 PSME1Q06323 249 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 PKP1Q13835 747 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
LETMD1-209ENST00000547318 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
LETMD1-209ENST00000547318 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
LETMD1-209ENST00000547318 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
LETMD1-209ENST00000547318 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
LETMD1-209ENST00000547318 ADCY9O60503 1353 aa17.67■□□□□ 0.42
LETMD1-209ENST00000547318 NCLP19338 710 aaKnown RBP17.67■□□□□ 0.42
LETMD1-209ENST00000547318 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
LETMD1-209ENST00000547318 PALD1Q9ULE6 856 aa17.67■□□□□ 0.42
LETMD1-209ENST00000547318 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
LETMD1-209ENST00000547318 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 HYPKQ9NX55 129 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
LETMD1-209ENST00000547318 HIP1O00291 1037 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
LETMD1-209ENST00000547318 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-209ENST00000547318 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-209ENST00000547318 UTYO14607 1347 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 DDX58O95786 925 aaKnown RBP17.65■□□□□ 0.42
LETMD1-209ENST00000547318 EIF2S2P20042 333 aaKnown RBP17.65■□□□□ 0.42
LETMD1-209ENST00000547318 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 ARHGEF25Q86VW2 580 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 UNC5CLQ8IV45 518 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 PDLIM2Q96JY6 352 aa17.65■□□□□ 0.42
LETMD1-209ENST00000547318 NUTM1Q86Y26 1132 aa17.64■□□□□ 0.41
LETMD1-209ENST00000547318 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
LETMD1-209ENST00000547318 ATP6V1DQ9Y5K8 247 aa17.64■□□□□ 0.41
LETMD1-209ENST00000547318 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
LETMD1-209ENST00000547318 MCM5P33992 734 aa17.64■□□□□ 0.41
LETMD1-209ENST00000547318 LSG1Q9H089 658 aaKnown RBP17.64■□□□□ 0.41
LETMD1-209ENST00000547318 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
LETMD1-209ENST00000547318 GIGYF1O75420 1035 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-209ENST00000547318 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 ESCO1Q5FWF5 840 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 KCNB2Q92953 911 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 ZSCAN31Q96LW9 406 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-209ENST00000547318 TTC14Q96N46 770 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 ECHDC1Q9NTX5 307 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 LIMCH1Q9UPQ0 1083 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-209ENST00000547318 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-209ENST00000547318 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
LETMD1-209ENST00000547318 GCP02774 474 aa17.61■□□□□ 0.41
LETMD1-209ENST00000547318 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
LETMD1-209ENST00000547318 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms