RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 RPAP2Q8IXW5 612 aaPredicted RBP12.86□□□□□ -0.35
NPAS3-205ENST00000547068 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
NPAS3-205ENST00000547068 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
NPAS3-205ENST00000547068 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
NPAS3-205ENST00000547068 NGDNQ8NEJ9 315 aaKnown RBP12.85□□□□□ -0.35
NPAS3-205ENST00000547068 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
NPAS3-205ENST00000547068 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
NPAS3-205ENST00000547068 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
NPAS3-205ENST00000547068 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
NPAS3-205ENST00000547068 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-205ENST00000547068 ZBTB22O15209 634 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 UBE2HP62256 183 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 SYCP1Q15431 976 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 SRCIN1Q9C0H9 1055 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
NPAS3-205ENST00000547068 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 FYB1O15117 783 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 AP5Z1O43299 807 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 ACEP12821 1306 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 VGLL3A8MV65 326 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 SLFN14P0C7P3 912 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
NPAS3-205ENST00000547068 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.36
NPAS3-205ENST00000547068 ANAPC15P60006 121 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
NPAS3-205ENST00000547068 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 PNPLA6Q8IY17 1366 aa12.82□□□□□ -0.36
NPAS3-205ENST00000547068 RGS12O14924 1447 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 C1orf167Q5SNV9 1468 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-205ENST00000547068 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 SMTNL1A8MU46 457 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 ZNF853P0CG23 659 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 PDE1AP54750 535 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 IPO4Q8TEX9 1081 aaKnown RBP12.81□□□□□ -0.36
NPAS3-205ENST00000547068 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-205ENST00000547068 KCNJ4P48050 445 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
NPAS3-205ENST00000547068 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-205ENST00000547068 MST1RQ04912 1400 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 HMOX1P09601 288 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 PTGS1P23219 599 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 PSME1Q06323 249 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 C16orf45Q96MC5 204 aaPredicted RBP12.8□□□□□ -0.36
NPAS3-205ENST00000547068 FIBPO43427 364 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
NPAS3-205ENST00000547068 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
NPAS3-205ENST00000547068 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
NPAS3-205ENST00000547068 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
NPAS3-205ENST00000547068 TERF2Q15554 542 aa12.79□□□□□ -0.36
NPAS3-205ENST00000547068 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
NPAS3-205ENST00000547068 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
NPAS3-205ENST00000547068 FOXO3O43524 673 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 TOM1O60784 492 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 TNNT1P13805 278 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 NAA30Q147X3 362 aaPredicted RBP12.78□□□□□ -0.36
NPAS3-205ENST00000547068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
NPAS3-205ENST00000547068 CCDC112Q8NEF3 446 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 HMMRO75330 724 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 ATP6V1DQ9Y5K8 247 aa12.78□□□□□ -0.36
NPAS3-205ENST00000547068 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 MEIS3Q99687 375 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
NPAS3-205ENST00000547068 AKAP12Q02952 1782 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 STX6O43752 255 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 TIGD1Q96MW7 591 aa12.77□□□□□ -0.37
NPAS3-205ENST00000547068 F13A1P00488 732 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 CHMLP26374 656 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 LRMPQ12912 555 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
NPAS3-205ENST00000547068 USP6P35125 1406 aa12.75□□□□□ -0.37
NPAS3-205ENST00000547068 SYT1P21579 422 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms