RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
CHD4-212ENST00000545083 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
CHD4-212ENST00000545083 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
CHD4-212ENST00000545083 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
CHD4-212ENST00000545083 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
CHD4-212ENST00000545083 TTLL6Q8N841 843 aa13□□□□□ -0.33
CHD4-212ENST00000545083 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
CHD4-212ENST00000545083 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 FOXN1O15353 648 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 ZPR1O75312 459 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 SERPINB2P05120 415 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
CHD4-212ENST00000545083 C2CD5Q86YS7 1000 aa12.98□□□□□ -0.33
CHD4-212ENST00000545083 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
CHD4-212ENST00000545083 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
CHD4-212ENST00000545083 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
CHD4-212ENST00000545083 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
CHD4-212ENST00000545083 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
CHD4-212ENST00000545083 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
CHD4-212ENST00000545083 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
CHD4-212ENST00000545083 COL15A1P39059 1388 aa12.96□□□□□ -0.33
CHD4-212ENST00000545083 SLC34A2O95436 690 aa12.96□□□□□ -0.33
CHD4-212ENST00000545083 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
CHD4-212ENST00000545083 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
CHD4-212ENST00000545083 H0YIN7 160 aa12.95□□□□□ -0.34
CHD4-212ENST00000545083 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
CHD4-212ENST00000545083 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
CHD4-212ENST00000545083 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 C21orf2O43822 256 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 SULT6B1Q6IMI4 303 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 LGR6Q9HBX8 967 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
CHD4-212ENST00000545083 DDNO94850 711 aaPredicted RBP12.93□□□□□ -0.34
CHD4-212ENST00000545083 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
CHD4-212ENST00000545083 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
CHD4-212ENST00000545083 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHD4-212ENST00000545083 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
CHD4-212ENST00000545083 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
CHD4-212ENST00000545083 VEGFBP49765 207 aa12.92□□□□□ -0.34
CHD4-212ENST00000545083 POLR3GLQ9BT43 218 aa12.92□□□□□ -0.34
CHD4-212ENST00000545083 MRC1P22897 1456 aa12.91□□□□□ -0.34
CHD4-212ENST00000545083 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
CHD4-212ENST00000545083 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
CHD4-212ENST00000545083 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
CHD4-212ENST00000545083 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
CHD4-212ENST00000545083 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
CHD4-212ENST00000545083 COL11A2P13942 1736 aaPredicted RBP12.91□□□□□ -0.34
CHD4-212ENST00000545083 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
CHD4-212ENST00000545083 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
CHD4-212ENST00000545083 IL13P35225 146 aa12.9□□□□□ -0.34
CHD4-212ENST00000545083 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
CHD4-212ENST00000545083 LBX1P52954 281 aa12.9□□□□□ -0.34
CHD4-212ENST00000545083 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
CHD4-212ENST00000545083 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.35
CHD4-212ENST00000545083 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
CHD4-212ENST00000545083 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
CHD4-212ENST00000545083 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
CHD4-212ENST00000545083 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
CHD4-212ENST00000545083 WBP1LQ9NX94 342 aa12.89□□□□□ -0.35
CHD4-212ENST00000545083 PDE6BP35913 854 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 AIDAQ96BJ3 306 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
CHD4-212ENST00000545083 PANK3Q9H999 370 aa12.88□□□□□ -0.35
CHD4-212ENST00000545083 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
CHD4-212ENST00000545083 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
CHD4-212ENST00000545083 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
CHD4-212ENST00000545083 SLX4Q8IY92 1834 aa12.86□□□□□ -0.35
CHD4-212ENST00000545083 HSPA8P11142 646 aaKnown RBP12.86□□□□□ -0.35
CHD4-212ENST00000545083 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
CHD4-212ENST00000545083 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
CHD4-212ENST00000545083 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CHD4-212ENST00000545083 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
CHD4-212ENST00000545083 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
CHD4-212ENST00000545083 MTHFSDQ2M296 383 aaKnown RBP12.85□□□□□ -0.35
CHD4-212ENST00000545083 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
CHD4-212ENST00000545083 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
CHD4-212ENST00000545083 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
CHD4-212ENST00000545083 UBR2Q8IWV8 1755 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 A0A087WZG4 1122 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 HMOX1P09601 288 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 SRGNP10124 158 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 STYK1Q6J9G0 422 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 C7orf43Q8WVR3 580 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
CHD4-212ENST00000545083 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
CHD4-212ENST00000545083 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
CHD4-212ENST00000545083 STARD3NLO95772 234 aa12.83□□□□□ -0.36
CHD4-212ENST00000545083 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
CHD4-212ENST00000545083 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
CHD4-212ENST00000545083 ADAMTSL1Q8N6G6 1762 aa12.82□□□□□ -0.36
CHD4-212ENST00000545083 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
CHD4-212ENST00000545083 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
CHD4-212ENST00000545083 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms