RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 USP16Q9Y5T5 823 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 KIF16BQ96L93 1317 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 BTAF1O14981 1849 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 N4BP2Q86UW6 1770 aaPredicted RBP8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 ZNF831Q5JPB2 1677 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 RBM6P78332 1123 aaKnown RBP8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 HDGFL1Q5TGJ6 251 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 ATF7IPQ6VMQ6 1270 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 ARHGAP45Q92619 1136 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 CHPF2Q9P2E5 772 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 RREB1Q92766 1687 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 ANXA1P04083 346 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 NBPF14Q5TI25 921 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 ZKSCAN2Q63HK3 967 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 NBPF10Q6P3W6 841 aaKnown RBP8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 NBPF15Q8N660 670 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 NECTIN2Q92692 538 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 KAT6BQ8WYB5 2073 aa8.94□□□□□ -0.98
HMGCS2-204ENST00000544913 SNRPA1P09661 255 aaKnown RBP8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 KCNA4P22459 653 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 CCDC30Q5VVM6 783 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 PPP4R3CPQ6ZMV5 832 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 CLUAP1Q96AJ1 413 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 ADCY9O60503 1353 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 COL5A3P25940 1745 aaPredicted RBP8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 FLIIQ13045 1269 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 TTC5Q8N0Z6 440 aa8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 PHAXQ9H814 394 aaKnown RBP8.93□□□□□ -0.98
HMGCS2-204ENST00000544913 LY75O60449 1722 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 EIF2S2P20042 333 aaKnown RBP8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 DNAJC10Q8IXB1 793 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 TMEM57Q8N5G2 664 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 PALLDQ8WX93 1383 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 PTPRCP08575 1304 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 A0A0G2JS52 829 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 DZIP1LQ8IYY4 767 aaKnown RBP8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 SYTL4Q96C24 671 aaPredicted RBP8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 DDX21Q9NR30 783 aaKnown RBP eCLIP8.92□□□□□ -0.98
HMGCS2-204ENST00000544913 PXDNLA1KZ92 1463 aa8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 F6X3S4 739 aa8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 PIP4K2AP48426 406 aaPredicted RBP8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 ITPK1Q13572 414 aa8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 MVPQ14764 893 aaKnown RBP8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 KRT27Q7Z3Y8 459 aa8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 DBF4Q9UBU7 674 aaPredicted RBP8.91□□□□□ -0.98
HMGCS2-204ENST00000544913 NUP188Q5SRE5 1749 aa8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 ERBB4Q15303 1308 aa8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 CYP19A1P11511 503 aaPredicted RBP8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 RXRBP28702 533 aa8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 INTS3Q68E01 1043 aaKnown RBP8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 STK31Q9BXU1 1019 aa8.9□□□□□ -0.98
HMGCS2-204ENST00000544913 LOC102724428A0A0B4J2F2 783 aa8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 IPO8O15397 1037 aaKnown RBP8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 A1BGP04217 495 aa8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 MS4A1P11836 297 aa8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 SIK1P57059 783 aa8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 API5Q9BZZ5 524 aaKnown RBP8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 TNS1Q9HBL0 1735 aaKnown RBP8.9□□□□□ -0.99
HMGCS2-204ENST00000544913 CANXP27824 592 aaKnown RBP8.89□□□□□ -0.99
HMGCS2-204ENST00000544913 AAMPQ13685 434 aa8.89□□□□□ -0.99
HMGCS2-204ENST00000544913 ZBTB40Q9NUA8 1239 aa8.89□□□□□ -0.99
HMGCS2-204ENST00000544913 TAF1LQ8IZX4 1826 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 ATP10DQ9P241 1426 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 ARFGEF2Q9Y6D5 1785 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 INTS5Q6P9B9 1019 aaKnown RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 RBM42Q9BTD8 480 aaKnown RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 HYPKQ9NX55 129 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 PI4KAP2A4QPH2 592 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 KCNQ4P56696 695 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 FKBP5Q13451 457 aaPredicted RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 PI4KAP1Q8N8J0 262 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 XAGE3Q8WTP9 111 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
HMGCS2-204ENST00000544913 MYL6BP14649 208 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 BEND3Q5T5X7 828 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 COPS6Q7L5N1 327 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 AMIGO3Q86WK7 504 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 SMARCC1Q92922 1105 aaPredicted RBP8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 ANP32EQ9BTT0 268 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 IBTKQ9P2D0 1353 aaPredicted RBP8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 KDM2BQ8NHM5 1336 aa8.87□□□□□ -0.99
HMGCS2-204ENST00000544913 KSR2Q6VAB6 950 aa8.86□□□□□ -0.99
HMGCS2-204ENST00000544913 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms