RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
RIMKLB-212ENST00000544257 SYTL4Q96C24 671 aaPredicted RBP12.89□□□□□ -0.35
RIMKLB-212ENST00000544257 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
RIMKLB-212ENST00000544257 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
RIMKLB-212ENST00000544257 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
RIMKLB-212ENST00000544257 ANP32CO43423 234 aa12.88□□□□□ -0.35
RIMKLB-212ENST00000544257 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
RIMKLB-212ENST00000544257 LY75O60449 1722 aa12.88□□□□□ -0.35
RIMKLB-212ENST00000544257 STK25O00506 426 aa12.87□□□□□ -0.35
RIMKLB-212ENST00000544257 MRC1P22897 1456 aa12.87□□□□□ -0.35
RIMKLB-212ENST00000544257 POTEMA6NI47 508 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 G3V3G9 751 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 MPRIPQ6WCQ1 1025 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 PIGBQ92521 554 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
RIMKLB-212ENST00000544257 NEFMP07197 916 aa12.85□□□□□ -0.35
RIMKLB-212ENST00000544257 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
RIMKLB-212ENST00000544257 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
RIMKLB-212ENST00000544257 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
RIMKLB-212ENST00000544257 VIRMAQ69YN4 1812 aaKnown RBP12.84□□□□□ -0.35
RIMKLB-212ENST00000544257 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
RIMKLB-212ENST00000544257 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 CABP4P57796 275 aa12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
RIMKLB-212ENST00000544257 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
RIMKLB-212ENST00000544257 SLC52A2Q9HAB3 445 aa12.82□□□□□ -0.36
RIMKLB-212ENST00000544257 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
RIMKLB-212ENST00000544257 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 ATG3Q9NT62 314 aa12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
RIMKLB-212ENST00000544257 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
RIMKLB-212ENST00000544257 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
RIMKLB-212ENST00000544257 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
RIMKLB-212ENST00000544257 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
RIMKLB-212ENST00000544257 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
RIMKLB-212ENST00000544257 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
RIMKLB-212ENST00000544257 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
RIMKLB-212ENST00000544257 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
RIMKLB-212ENST00000544257 C5P01031 1676 aa12.79□□□□□ -0.36
RIMKLB-212ENST00000544257 DLG5Q8TDM6 1919 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 SIK1P57059 783 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 TEFQ10587 303 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
RIMKLB-212ENST00000544257 SLC15A2Q16348 729 aa12.77□□□□□ -0.36
RIMKLB-212ENST00000544257 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.36
RIMKLB-212ENST00000544257 MRS2Q9HD23 443 aa12.77□□□□□ -0.36
RIMKLB-212ENST00000544257 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
RIMKLB-212ENST00000544257 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
RIMKLB-212ENST00000544257 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
RIMKLB-212ENST00000544257 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
RIMKLB-212ENST00000544257 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
RIMKLB-212ENST00000544257 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
RIMKLB-212ENST00000544257 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
RIMKLB-212ENST00000544257 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
RIMKLB-212ENST00000544257 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
RIMKLB-212ENST00000544257 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
RIMKLB-212ENST00000544257 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
RIMKLB-212ENST00000544257 MCM10Q7L590 875 aa12.75□□□□□ -0.37
RIMKLB-212ENST00000544257 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
RIMKLB-212ENST00000544257 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 KCNQ4P56696 695 aa12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
RIMKLB-212ENST00000544257 RIPK4P57078 832 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 ITPK1Q13572 414 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 TJP1Q07157 1748 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 TTC5Q8N0Z6 440 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 TUBGCP6Q96RT7 1819 aa12.73□□□□□ -0.37
RIMKLB-212ENST00000544257 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms