RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 MFRPQ9BY79 579 aa7.04□□□□□ -1.28
NPIPB4-219ENST00000543660 CCNL1Q9UK58 526 aaPredicted RBP7.04□□□□□ -1.28
NPIPB4-219ENST00000543660 NBPF1Q3BBV0 1214 aa7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 RBM46Q8TBY0 533 aaKnown RBP7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 DDX54Q8TDD1 881 aaKnown RBP7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 NMRK2Q9NPI5 230 aa7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 LY75O60449 1722 aa7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 WDR90Q96KV7 1748 aa7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 ANKRD36BQ8N2N9 1353 aa7.03□□□□□ -1.28
NPIPB4-219ENST00000543660 CENPJQ9HC77 1338 aaPredicted RBP7.02□□□□□ -1.28
NPIPB4-219ENST00000543660 TMC2Q8TDI7 906 aa7.02□□□□□ -1.29
NPIPB4-219ENST00000543660 ANKRD24Q8TF21 1146 aa7.02□□□□□ -1.29
NPIPB4-219ENST00000543660 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
NPIPB4-219ENST00000543660 STK24Q9Y6E0 443 aa7.02□□□□□ -1.29
NPIPB4-219ENST00000543660 TTC21AQ8NDW8 1320 aa7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 CICQ96RK0 1608 aaPredicted RBP7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 QRICH2Q9H0J4 1663 aa7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 FSTL1Q12841 308 aa7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
NPIPB4-219ENST00000543660 RGL2O15211 777 aa7□□□□□ -1.29
NPIPB4-219ENST00000543660 USP31Q70CQ4 1352 aa6.99□□□□□ -1.29
NPIPB4-219ENST00000543660 USP47Q96K76 1375 aa6.99□□□□□ -1.29
NPIPB4-219ENST00000543660 HRO43593 1189 aa6.99□□□□□ -1.29
NPIPB4-219ENST00000543660 HSPA1AP0DMV8 641 aaKnown RBP6.99□□□□□ -1.29
NPIPB4-219ENST00000543660 HSPA1BP0DMV9 641 aaKnown RBP6.99□□□□□ -1.29
NPIPB4-219ENST00000543660 KIAA1210Q9ULL0 1709 aa6.98□□□□□ -1.29
NPIPB4-219ENST00000543660 STK25O00506 426 aa6.98□□□□□ -1.29
NPIPB4-219ENST00000543660 SMIM5Q71RC9 77 aa6.98□□□□□ -1.29
NPIPB4-219ENST00000543660 DOT1LQ8TEK3 1739 aa6.98□□□□□ -1.29
NPIPB4-219ENST00000543660 EVC2Q86UK5 1308 aa6.98□□□□□ -1.29
NPIPB4-219ENST00000543660 KTN1Q86UP2 1357 aaKnown RBP6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 USP54Q70EL1 1684 aa6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 RGS20O76081 388 aa6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 ARHGAP27Q6ZUM4 889 aa6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 NME9Q86XW9 330 aa6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 C16orf71Q8IYS4 520 aaPredicted RBP6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 PXDNLA1KZ92 1463 aa6.97□□□□□ -1.29
NPIPB4-219ENST00000543660 C5P01031 1676 aa6.96□□□□□ -1.29
NPIPB4-219ENST00000543660 RAB3GAP2Q9H2M9 1393 aa6.96□□□□□ -1.29
NPIPB4-219ENST00000543660 A0A0G2JLW4 131 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 PHF14O94880 888 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 HMGB2P26583 209 aaKnown RBP6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 TGFB2P61812 414 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 C9orf131Q5VYM1 1079 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 PTCD2Q8WV60 388 aaKnown RBP6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 IP6K1Q92551 441 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 LTV1Q96GA3 475 aaPredicted RBP6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 BCS1LQ9Y276 419 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 TOGARAM1Q9Y4F4 1720 aa6.96□□□□□ -1.3
NPIPB4-219ENST00000543660 PALLDQ8WX93 1383 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 SBNO2Q9Y2G9 1366 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 LTN1O94822 1766 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 C10orf71Q711Q0 1435 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 TAF1LQ8IZX4 1826 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 AK7Q96M32 723 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 RRAGCQ9HB90 399 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 KIAA1551Q9HCM1 1747 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 MEGF6O75095 1541 aa6.95□□□□□ -1.3
NPIPB4-219ENST00000543660 UBR3Q6ZT12 1888 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 C4BP0C0L5 1744 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 MMP10P09238 476 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 SSFA2P28290 1259 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 DMRTA1Q5VZB9 504 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 KCTD12Q96CX2 325 aaKnown RBP6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 KCPQ6ZWJ8 1503 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 KIF13BQ9NQT8 1826 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 PLEKHG2Q9H7P9 1386 aa6.94□□□□□ -1.3
NPIPB4-219ENST00000543660 FAM208AQ9UK61 1670 aaKnown RBP6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 CD163L1Q9NR16 1453 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 FCHSD2O94868 740 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 DPEP1P16444 411 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 KCNA3P22001 575 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 PSEN2P49810 448 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 HS6ST3Q8IZP7 471 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 MON2Q7Z3U7 1717 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 NSD3Q9BZ95 1437 aa6.93□□□□□ -1.3
NPIPB4-219ENST00000543660 N4BP2Q86UW6 1770 aaPredicted RBP6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 HOXC9P31274 260 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 SMARCC1Q92922 1105 aaPredicted RBP6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 CGNL1Q0VF96 1302 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 MAP3K19Q56UN5 1328 aa6.92□□□□□ -1.3
NPIPB4-219ENST00000543660 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 TBC1D12O60347 775 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 FBLN1P23142 703 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 SIK1P57059 783 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 PIGBQ92521 554 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 DCAF5Q96JK2 942 aa6.91□□□□□ -1.3
NPIPB4-219ENST00000543660 RNF181Q9P0P0 153 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms