RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 NALCNQ8IZF0 1738 aa7.89□□□□□ -1.15
CDKN3-206ENST00000541304 PLEKHH1Q9ULM0 1364 aa7.88□□□□□ -1.15
CDKN3-206ENST00000541304 WASHC2AQ641Q2 1341 aa7.88□□□□□ -1.15
CDKN3-206ENST00000541304 SRPK2P78362 688 aaKnown RBP7.88□□□□□ -1.15
CDKN3-206ENST00000541304 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
CDKN3-206ENST00000541304 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
CDKN3-206ENST00000541304 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.88□□□□□ -1.15
CDKN3-206ENST00000541304 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
CDKN3-206ENST00000541304 ANKRD36BQ8N2N9 1353 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 ZNF335Q9H4Z2 1342 aaPredicted RBP7.87□□□□□ -1.15
CDKN3-206ENST00000541304 KIF1AQ12756 1690 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 TOPAZ1Q8N9V7 1692 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 TRIM32Q13049 653 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 WAPLQ7Z5K2 1190 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 C14orf37Q86TY3 774 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
CDKN3-206ENST00000541304 TERF2IPQ9NYB0 399 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 LTBP4Q8N2S1 1624 aa7.87□□□□□ -1.15
CDKN3-206ENST00000541304 JUNDP17535 347 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 ATF3P18847 181 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 SAFB2Q14151 953 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDKN3-206ENST00000541304 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
CDKN3-206ENST00000541304 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 CDK19Q9BWU1 502 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 STRCP1A6NGW2 1772 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 MYOM1P52179 1685 aa7.86□□□□□ -1.15
CDKN3-206ENST00000541304 NSD2O96028 1365 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 USP32Q8NFA0 1604 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 NPC1L1Q9UHC9 1359 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 SSTR3P32745 418 aaPredicted RBP7.85□□□□□ -1.15
CDKN3-206ENST00000541304 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
CDKN3-206ENST00000541304 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 TOR4AQ9NXH8 423 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 PPIP5K1Q6PFW1 1433 aa7.85□□□□□ -1.15
CDKN3-206ENST00000541304 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.15
CDKN3-206ENST00000541304 PLEKHG3A1L390 1219 aa7.84□□□□□ -1.15
CDKN3-206ENST00000541304 WNT7AO00755 349 aa7.84□□□□□ -1.15
CDKN3-206ENST00000541304 FDX1P10109 184 aa7.84□□□□□ -1.15
CDKN3-206ENST00000541304 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
CDKN3-206ENST00000541304 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
CDKN3-206ENST00000541304 MST1RQ04912 1400 aa7.84□□□□□ -1.15
CDKN3-206ENST00000541304 EDC4Q6P2E9 1401 aaKnown RBP7.84□□□□□ -1.15
CDKN3-206ENST00000541304 C1orf167Q5SNV9 1468 aa7.83□□□□□ -1.16
CDKN3-206ENST00000541304 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
CDKN3-206ENST00000541304 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
CDKN3-206ENST00000541304 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
CDKN3-206ENST00000541304 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
CDKN3-206ENST00000541304 CRIPAKQ8N1N5 446 aa7.82□□□□□ -1.16
CDKN3-206ENST00000541304 SPIRE2Q8WWL2 714 aa7.82□□□□□ -1.16
CDKN3-206ENST00000541304 SYMPKQ92797 1274 aaKnown RBP7.82□□□□□ -1.16
CDKN3-206ENST00000541304 CGNL1Q0VF96 1302 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 NPHP3Q7Z494 1330 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 TTC21AQ8NDW8 1320 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 USP6P35125 1406 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 XIRP1Q702N8 1843 aaKnown RBP7.81□□□□□ -1.16
CDKN3-206ENST00000541304 TTC24A2A3L6 582 aaPredicted RBP7.81□□□□□ -1.16
CDKN3-206ENST00000541304 C11orf95C9JLR9 678 aaPredicted RBP7.81□□□□□ -1.16
CDKN3-206ENST00000541304 AVPP01185 164 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 TMC1Q8TDI8 760 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 NUDT12Q9BQG2 462 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 POLR3GLQ9BT43 218 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 PCDHGC3Q9UN70 934 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 KNSTRNQ9Y448 316 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 A0A1W2PP64 1363 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 CD163L1Q9NR16 1453 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 MON2Q7Z3U7 1717 aa7.81□□□□□ -1.16
CDKN3-206ENST00000541304 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 NRKQ7Z2Y5 1582 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 AKAP12Q02952 1782 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 TOM1O60784 492 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 WNT7BP56706 349 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 PARP9Q8IXQ6 854 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 AAASQ9NRG9 546 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
CDKN3-206ENST00000541304 NSD3Q9BZ95 1437 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 PSME1Q06323 249 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 DDX10Q13206 875 aaKnown RBP7.79□□□□□ -1.16
CDKN3-206ENST00000541304 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 DIEXFQ68CQ4 756 aaKnown RBP7.79□□□□□ -1.16
CDKN3-206ENST00000541304 NGDNQ8NEJ9 315 aaKnown RBP7.79□□□□□ -1.16
CDKN3-206ENST00000541304 SNIP1Q8TAD8 396 aaKnown RBP7.79□□□□□ -1.16
CDKN3-206ENST00000541304 MRGPRX2Q96LB1 330 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 BEGAINQ9BUH8 593 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 PANK3Q9H999 370 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 SLAIN2Q9P270 581 aa7.79□□□□□ -1.16
CDKN3-206ENST00000541304 ACEP12821 1306 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 TRIM66O15016 1216 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 ANP32CO43423 234 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 MS4A1P11836 297 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 NDUFV2P19404 249 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 RALBP1Q15311 655 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 DIXDC1Q155Q3 683 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 ESCO1Q5FWF5 840 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 AK7Q96M32 723 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 SBNO1A3KN83 1393 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 USP54Q70EL1 1684 aa7.78□□□□□ -1.16
CDKN3-206ENST00000541304 AHDC1Q5TGY3 1603 aaPredicted RBP7.78□□□□□ -1.16
CDKN3-206ENST00000541304 SSH2Q76I76 1423 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms