RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-205ENST00000541110 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-205ENST00000541110 PHACTR2O75167 634 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-205ENST00000541110 ERICH4A6NGS2 130 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 CAMK4Q16566 473 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 RAPGEF2Q9Y4G8 1499 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 CCDC175P0C221 793 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 MAP3K12Q12852 859 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-205ENST00000541110 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
TRERF1-205ENST00000541110 RRS1Q15050 365 aaKnown RBP11.59□□□□□ -0.55
TRERF1-205ENST00000541110 CATIPQ7Z7H3 387 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 CALML4Q96GE6 196 aa11.59□□□□□ -0.55
TRERF1-205ENST00000541110 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
TRERF1-205ENST00000541110 TERF1P54274 439 aa11.58□□□□□ -0.55
TRERF1-205ENST00000541110 SLC12A7Q9Y666 1083 aa11.58□□□□□ -0.55
TRERF1-205ENST00000541110 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
TRERF1-205ENST00000541110 SPECC1Q5M775 1068 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-205ENST00000541110 FILIP1Q7Z7B0 1213 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC144CPQ8IYA2 1237 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 MYD88Q99836 296 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
TRERF1-205ENST00000541110 STXBP4Q6ZWJ1 553 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 ALS2CR12Q96Q35 445 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
TRERF1-205ENST00000541110 DDX46Q7L014 1031 aaKnown RBP11.58□□□□□ -0.56
TRERF1-205ENST00000541110 GUCY1B3Q02153 619 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 RBM26Q5T8P6 1007 aaKnown RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 SNX16P57768 344 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 PAIP2Q9BPZ3 127 aaKnown RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 F8W031 263 aaPredicted RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 HLTFQ14527 1009 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 KRT32Q14532 448 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 SHTN1A0MZ66 631 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 STX6O43752 255 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 IL1RAPL2Q9NP60 686 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC194A0A1B0GVG4 234 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
TRERF1-205ENST00000541110 NUP62CLQ9H1M0 184 aa11.57□□□□□ -0.56
TRERF1-205ENST00000541110 GPTP24298 496 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 RNF187Q5TA31 235 aaPredicted RBP11.56□□□□□ -0.56
TRERF1-205ENST00000541110 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 FYCO1Q9BQS8 1478 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 KIF5CO60282 957 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 MRE11P49959 708 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 MAP9Q49MG5 647 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 MTIF2P46199 727 aaKnown RBP11.56□□□□□ -0.56
TRERF1-205ENST00000541110 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 HAUS7Q99871 368 aa11.56□□□□□ -0.56
TRERF1-205ENST00000541110 ZNF213O14771 459 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 USO1O60763 962 aaKnown RBP11.55□□□□□ -0.56
TRERF1-205ENST00000541110 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC63Q8NA47 563 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-205ENST00000541110 HDAC9Q9UKV0 1011 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 WIZO95785 1651 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-205ENST00000541110 CFAP58Q5T655 872 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 BAG3O95817 575 aa11.55□□□□□ -0.56
TRERF1-205ENST00000541110 PRPF31Q8WWY3 499 aaKnown RBP11.55□□□□□ -0.56
TRERF1-205ENST00000541110 MXRA7P84157 204 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
TRERF1-205ENST00000541110 BOLA2Q9H3K6 86 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 RTEL1-TNFRSF6BF6WH68 1400 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
TRERF1-205ENST00000541110 TSPY2A6NKD2 308 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 TCP11L2Q8N4U5 519 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 VEZTQ9HBM0 779 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 EXOC5O00471 708 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 PAFAH1B1P43034 410 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 AMPD3Q01432 767 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 MAP7D1Q3KQU3 841 aa11.54□□□□□ -0.56
TRERF1-205ENST00000541110 CPLX3Q8WVH0 158 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
TRERF1-205ENST00000541110 PRKRIP1Q9H875 184 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-205ENST00000541110 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 C6orf163Q5TEZ5 329 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 SMC1BQ8NDV3 1235 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 POLD1P28340 1107 aa11.53□□□□□ -0.56
TRERF1-205ENST00000541110 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms