RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ADAMTS7Q9UKP4 1686 aa27.15■■□□□ 1.94
LPCAT3-210ENST00000540090 KCPQ6ZWJ8 1503 aa27.15■■□□□ 1.94
LPCAT3-210ENST00000540090 SCN11AQ9UI33 1791 aa27.14■■□□□ 1.94
LPCAT3-210ENST00000540090 VSIG10Q8N0Z9 540 aa27.13■■□□□ 1.93
LPCAT3-210ENST00000540090 ZBTB1Q9Y2K1 713 aa27.13■■□□□ 1.93
LPCAT3-210ENST00000540090 HMOX1P09601 288 aa27.12■■□□□ 1.93
LPCAT3-210ENST00000540090 KLRG1Q96E93 195 aa27.12■■□□□ 1.93
LPCAT3-210ENST00000540090 BCL2L12Q9HB09 334 aa27.12■■□□□ 1.93
LPCAT3-210ENST00000540090 HTRA3P83110 453 aa27.11■■□□□ 1.93
LPCAT3-210ENST00000540090 MTHFSDQ2M296 383 aaKnown RBP27.11■■□□□ 1.93
LPCAT3-210ENST00000540090 COL15A1P39059 1388 aa27.1■■□□□ 1.93
LPCAT3-210ENST00000540090 SERPINB2P05120 415 aa27.1■■□□□ 1.93
LPCAT3-210ENST00000540090 MRC1P22897 1456 aa27.1■■□□□ 1.93
LPCAT3-210ENST00000540090 ZC3H4Q9UPT8 1303 aaKnown RBP27.1■■□□□ 1.93
LPCAT3-210ENST00000540090 JMYQ8N9B5 988 aa27.09■■□□□ 1.93
LPCAT3-210ENST00000540090 RASSF7Q02833 373 aa27.08■■□□□ 1.93
LPCAT3-210ENST00000540090 LMNB1P20700 586 aa27.07■■□□□ 1.92
LPCAT3-210ENST00000540090 TTLL6Q8N841 843 aa27.07■■□□□ 1.92
LPCAT3-210ENST00000540090 SMC1BQ8NDV3 1235 aa27.06■■□□□ 1.92
LPCAT3-210ENST00000540090 WDR90Q96KV7 1748 aa27.05■■□□□ 1.92
LPCAT3-210ENST00000540090 SBF1O95248 1867 aa27.05■■□□□ 1.92
LPCAT3-210ENST00000540090 DIAPH1O60610 1272 aaKnown RBP27.05■■□□□ 1.92
LPCAT3-210ENST00000540090 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
LPCAT3-210ENST00000540090 PRELPP51888 382 aa27.05■■□□□ 1.92
LPCAT3-210ENST00000540090 PER1O15534 1290 aaPredicted RBP27.04■■□□□ 1.92
LPCAT3-210ENST00000540090 EIF5P55010 431 aaKnown RBP27.04■■□□□ 1.92
LPCAT3-210ENST00000540090 C2CD5Q86YS7 1000 aa27.04■■□□□ 1.92
LPCAT3-210ENST00000540090 GLTPD2A6NH11 291 aa27.03■■□□□ 1.92
LPCAT3-210ENST00000540090 H0YIN7 160 aa27.03■■□□□ 1.92
LPCAT3-210ENST00000540090 STARD3NLO95772 234 aa27.03■■□□□ 1.92
LPCAT3-210ENST00000540090 NRXN2Q9P2S2 1712 aa27.02■■□□□ 1.92
LPCAT3-210ENST00000540090 VEGFAP15692 232 aaPredicted RBP27.02■■□□□ 1.92
LPCAT3-210ENST00000540090 KIF7Q2M1P5 1343 aa27.01■■□□□ 1.91
LPCAT3-210ENST00000540090 A0A087WZG4 1122 aa27.01■■□□□ 1.91
LPCAT3-210ENST00000540090 AFDNP55196 1824 aaKnown RBP27■■□□□ 1.91
LPCAT3-210ENST00000540090 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
LPCAT3-210ENST00000540090 NFKBIEO00221 500 aa26.99■■□□□ 1.91
LPCAT3-210ENST00000540090 BICDL1Q6ZP65 573 aa26.99■■□□□ 1.91
LPCAT3-210ENST00000540090 PCNTO95613 3336 aa26.99■■□□□ 1.91
LPCAT3-210ENST00000540090 TNRC6CQ9HCJ0 1690 aaKnown RBP26.98■■□□□ 1.91
LPCAT3-210ENST00000540090 CARMIL3Q8ND23 1372 aa26.98■■□□□ 1.91
LPCAT3-210ENST00000540090 CC2D1BQ5T0F9 858 aaKnown RBP26.98■■□□□ 1.91
LPCAT3-210ENST00000540090 TBC1D9BQ66K14 1250 aa26.97■■□□□ 1.91
LPCAT3-210ENST00000540090 IL17REQ8NFR9 667 aa26.97■■□□□ 1.91
LPCAT3-210ENST00000540090 ZNF496Q96IT1 587 aaPredicted RBP26.97■■□□□ 1.91
LPCAT3-210ENST00000540090 TEX13AQ9BXU3 409 aaPredicted RBP26.97■■□□□ 1.91
LPCAT3-210ENST00000540090 PDZRN3Q9UPQ7 1066 aa26.97■■□□□ 1.91
LPCAT3-210ENST00000540090 COL13A1Q5TAT6 717 aaPredicted RBP26.96■■□□□ 1.91
LPCAT3-210ENST00000540090 ZNF790Q6PG37 636 aa26.96■■□□□ 1.91
LPCAT3-210ENST00000540090 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
LPCAT3-210ENST00000540090 BRIP1Q9BX63 1249 aa26.95■■□□□ 1.9
LPCAT3-210ENST00000540090 HEG1Q9ULI3 1381 aa26.95■■□□□ 1.9
LPCAT3-210ENST00000540090 PDE6BP35913 854 aa26.94■■□□□ 1.9
LPCAT3-210ENST00000540090 TEFQ10587 303 aa26.94■■□□□ 1.9
LPCAT3-210ENST00000540090 GNAT3A8MTJ3 354 aa26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 POTECB2RU33 542 aa26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 IL6STP40189 918 aaPredicted RBP26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 GAS2L2Q8NHY3 880 aa26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 ZNF622Q969S3 477 aaKnown RBP eCLIP26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 TBC1D2BQ9UPU7 963 aa26.93■■□□□ 1.9
LPCAT3-210ENST00000540090 PRR5LQ6MZQ0 368 aa26.92■■□□□ 1.9
LPCAT3-210ENST00000540090 DPY19L2Q6NUT2 758 aa26.92■■□□□ 1.9
LPCAT3-210ENST00000540090 UBR2Q8IWV8 1755 aa26.92■■□□□ 1.9
LPCAT3-210ENST00000540090 DLEC1Q9Y238 1755 aa26.92■■□□□ 1.9
LPCAT3-210ENST00000540090 U2SURPO15042 1029 aaKnown RBP26.9■■□□□ 1.9
LPCAT3-210ENST00000540090 C21orf2O43822 256 aa26.9■■□□□ 1.9
LPCAT3-210ENST00000540090 VIRMAQ69YN4 1812 aaKnown RBP26.9■■□□□ 1.9
LPCAT3-210ENST00000540090 CCDC24Q8N4L8 307 aa26.89■■□□□ 1.9
LPCAT3-210ENST00000540090 FMNL2Q96PY5 1086 aa26.89■■□□□ 1.9
LPCAT3-210ENST00000540090 ZNF330Q9Y3S2 320 aaPredicted RBP26.89■■□□□ 1.9
LPCAT3-210ENST00000540090 A1BGP04217 495 aa26.88■■□□□ 1.89
LPCAT3-210ENST00000540090 NPC1L1Q9UHC9 1359 aa26.87■■□□□ 1.89
LPCAT3-210ENST00000540090 ERFEQ4G0M1 354 aa26.87■■□□□ 1.89
LPCAT3-210ENST00000540090 SETDB2Q96T68 719 aa26.87■■□□□ 1.89
LPCAT3-210ENST00000540090 COL3A1P02461 1466 aaPredicted RBP26.87■■□□□ 1.89
LPCAT3-210ENST00000540090 CAMTA2O94983 1202 aa26.86■■□□□ 1.89
LPCAT3-210ENST00000540090 ZNF219Q9P2Y4 722 aaPredicted RBP26.86■■□□□ 1.89
LPCAT3-210ENST00000540090 NPM2Q86SE8 214 aaKnown RBP26.85■■□□□ 1.89
LPCAT3-210ENST00000540090 LTBP3Q9NS15 1303 aa26.85■■□□□ 1.89
LPCAT3-210ENST00000540090 CEMIPQ8WUJ3 1361 aa26.84■■□□□ 1.89
LPCAT3-210ENST00000540090 CNBD1Q8NA66 436 aa26.84■■□□□ 1.89
LPCAT3-210ENST00000540090 CNKSR1Q969H4 720 aa26.84■■□□□ 1.89
LPCAT3-210ENST00000540090 KCNQ3O43525 872 aa26.83■■□□□ 1.89
LPCAT3-210ENST00000540090 STYK1Q6J9G0 422 aa26.83■■□□□ 1.89
LPCAT3-210ENST00000540090 TAOK3Q9H2K8 898 aa26.83■■□□□ 1.89
LPCAT3-210ENST00000540090 BTBD11A6QL63 1104 aa26.82■■□□□ 1.88
LPCAT3-210ENST00000540090 SRGNP10124 158 aa26.82■■□□□ 1.88
LPCAT3-210ENST00000540090 PHACTR3Q96KR7 559 aa26.82■■□□□ 1.88
LPCAT3-210ENST00000540090 ANKRD31Q8N7Z5 1873 aa26.82■■□□□ 1.88
LPCAT3-210ENST00000540090 CCDC88AQ3V6T2 1871 aa26.81■■□□□ 1.88
LPCAT3-210ENST00000540090 ST5P78524 1137 aa26.81■■□□□ 1.88
LPCAT3-210ENST00000540090 TNS4Q8IZW8 715 aa26.81■■□□□ 1.88
LPCAT3-210ENST00000540090 NPHP1O15259 732 aa26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 HSPA1AP0DMV8 641 aaKnown RBP26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 HSPA1BP0DMV9 641 aaKnown RBP26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 CNGB1Q14028 1251 aaPredicted RBP26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 DZIP3Q86Y13 1208 aaKnown RBP26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 MASTLQ96GX5 879 aa26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 USP16Q9Y5T5 823 aa26.8■■□□□ 1.88
LPCAT3-210ENST00000540090 TIAM2Q8IVF5 1701 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms