RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 LRRFIP2Q9Y608 721 aaKnown RBP25.4■■□□□ 1.66
DDX55-205ENST00000538744 COL16A1Q07092 1604 aaPredicted RBP25.39■■□□□ 1.65
DDX55-205ENST00000538744 ATP8B2P98198 1209 aa25.39■■□□□ 1.65
DDX55-205ENST00000538744 NKX1-1Q15270 411 aaPredicted RBP25.39■■□□□ 1.65
DDX55-205ENST00000538744 SNRPA1P09661 255 aaKnown RBP25.38■■□□□ 1.65
DDX55-205ENST00000538744 KSR2Q6VAB6 950 aa25.38■■□□□ 1.65
DDX55-205ENST00000538744 ERVV-2B6SEH9 535 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 DDX58O95786 925 aaKnown RBP25.37■■□□□ 1.65
DDX55-205ENST00000538744 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 UBR2Q8IWV8 1755 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 PAPPAQ13219 1627 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 PHLPP1O60346 1717 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 GLI3P10071 1580 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 PDIA6Q15084 440 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 MAP3K2Q9Y2U5 619 aa25.37■■□□□ 1.65
DDX55-205ENST00000538744 ALDH1L1O75891 902 aa25.35■■□□□ 1.65
DDX55-205ENST00000538744 PLEKHM2Q8IWE5 1019 aa25.35■■□□□ 1.65
DDX55-205ENST00000538744 ANP32EQ9BTT0 268 aa25.35■■□□□ 1.65
DDX55-205ENST00000538744 PLCH1Q4KWH8 1693 aa25.34■■□□□ 1.65
DDX55-205ENST00000538744 PNMA6EA0A0J9YXQ4 647 aa25.33■■□□□ 1.65
DDX55-205ENST00000538744 DDX54Q8TDD1 881 aaKnown RBP25.33■■□□□ 1.65
DDX55-205ENST00000538744 TBC1D32Q96NH3 1257 aa25.32■■□□□ 1.64
DDX55-205ENST00000538744 TOGARAM1Q9Y4F4 1720 aa25.32■■□□□ 1.64
DDX55-205ENST00000538744 APBB1O00213 710 aa25.32■■□□□ 1.64
DDX55-205ENST00000538744 SMARCA5O60264 1052 aaPredicted RBP25.31■■□□□ 1.64
DDX55-205ENST00000538744 NBPF7P0C2Y1 421 aaPredicted RBP25.3■■□□□ 1.64
DDX55-205ENST00000538744 SSH3Q8TE77 659 aa25.3■■□□□ 1.64
DDX55-205ENST00000538744 USP35Q9P2H5 1018 aa25.3■■□□□ 1.64
DDX55-205ENST00000538744 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
DDX55-205ENST00000538744 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
DDX55-205ENST00000538744 AIMP1Q12904 312 aaKnown RBP25.29■■□□□ 1.64
DDX55-205ENST00000538744 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
DDX55-205ENST00000538744 LINS1Q8NG48 757 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 EXOC6BQ9Y2D4 811 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 IBTKQ9P2D0 1353 aaPredicted RBP25.29■■□□□ 1.64
DDX55-205ENST00000538744 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 MYL6BP14649 208 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 TTC22Q5TAA0 569 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
DDX55-205ENST00000538744 HDAC5Q9UQL6 1122 aa25.29■■□□□ 1.64
DDX55-205ENST00000538744 DISP2A7MBM2 1401 aa25.28■■□□□ 1.64
DDX55-205ENST00000538744 MFAP1P55081 439 aaKnown RBP25.28■■□□□ 1.64
DDX55-205ENST00000538744 LRRCC1Q9C099 1032 aa25.28■■□□□ 1.64
DDX55-205ENST00000538744 POLA2Q14181 598 aa25.27■■□□□ 1.64
DDX55-205ENST00000538744 RIC3Q7Z5B4 369 aa25.27■■□□□ 1.64
DDX55-205ENST00000538744 XAGE3Q8WTP9 111 aa25.27■■□□□ 1.64
DDX55-205ENST00000538744 C9orf78Q9NZ63 289 aaPredicted RBP25.27■■□□□ 1.64
DDX55-205ENST00000538744 GSPT1P15170 499 aaKnown RBP25.26■■□□□ 1.63
DDX55-205ENST00000538744 PPP1R42Q7Z4L9 355 aa25.26■■□□□ 1.63
DDX55-205ENST00000538744 OTUD7AQ8TE49 926 aaPredicted RBP25.26■■□□□ 1.63
DDX55-205ENST00000538744 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
DDX55-205ENST00000538744 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
DDX55-205ENST00000538744 TNS2Q63HR2 1409 aa25.26■■□□□ 1.63
DDX55-205ENST00000538744 COPS6Q7L5N1 327 aa25.25■■□□□ 1.63
DDX55-205ENST00000538744 LRP10Q7Z4F1 713 aa25.25■■□□□ 1.63
DDX55-205ENST00000538744 ARFGEF2Q9Y6D5 1785 aa25.25■■□□□ 1.63
DDX55-205ENST00000538744 CDC45O75419 566 aa25.24■■□□□ 1.63
DDX55-205ENST00000538744 NEXNQ0ZGT2 675 aa25.24■■□□□ 1.63
DDX55-205ENST00000538744 CWF19L2Q2TBE0 894 aaKnown RBP25.24■■□□□ 1.63
DDX55-205ENST00000538744 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
DDX55-205ENST00000538744 NRAPQ86VF7 1730 aa25.24■■□□□ 1.63
DDX55-205ENST00000538744 UTYO14607 1347 aa25.23■■□□□ 1.63
DDX55-205ENST00000538744 SRGAP3O43295 1099 aa25.23■■□□□ 1.63
DDX55-205ENST00000538744 OSBPL3Q9H4L5 887 aa25.23■■□□□ 1.63
DDX55-205ENST00000538744 ITGB4P16144 1822 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 TOM1O60784 492 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 RAB11FIP3O75154 756 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 MTX1Q13505 466 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 TBC1D9Q6ZT07 1266 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 TMOD3Q9NYL9 352 aa25.22■■□□□ 1.63
DDX55-205ENST00000538744 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
DDX55-205ENST00000538744 GRM8O00222 908 aa25.21■■□□□ 1.63
DDX55-205ENST00000538744 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
DDX55-205ENST00000538744 ANKRD13DQ6ZTN6 518 aa25.21■■□□□ 1.63
DDX55-205ENST00000538744 METTL22Q9BUU2 404 aaPredicted RBP25.21■■□□□ 1.63
DDX55-205ENST00000538744 LRP6O75581 1613 aa25.21■■□□□ 1.63
DDX55-205ENST00000538744 IGKV5-2P06315 115 aa25.2■■□□□ 1.62
DDX55-205ENST00000538744 PDE1AP54750 535 aa25.2■■□□□ 1.62
DDX55-205ENST00000538744 SALL3Q9BXA9 1300 aa25.19■■□□□ 1.62
DDX55-205ENST00000538744 SURF6O75683 361 aaKnown RBP25.19■■□□□ 1.62
DDX55-205ENST00000538744 BECN1Q14457 450 aa25.19■■□□□ 1.62
DDX55-205ENST00000538744 TUBGCP6Q96RT7 1819 aa25.18■■□□□ 1.62
DDX55-205ENST00000538744 PIP4K2AP48426 406 aaPredicted RBP25.18■■□□□ 1.62
DDX55-205ENST00000538744 HSP90AB4PQ58FF6 505 aa25.18■■□□□ 1.62
DDX55-205ENST00000538744 NEURL1BA8MQ27 555 aa25.17■■□□□ 1.62
DDX55-205ENST00000538744 MYD88Q99836 296 aa25.17■■□□□ 1.62
DDX55-205ENST00000538744 NWD2Q9ULI1 1742 aa25.17■■□□□ 1.62
DDX55-205ENST00000538744 PTCD1O75127 700 aaKnown RBP25.17■■□□□ 1.62
DDX55-205ENST00000538744 ADAMTS2O95450 1211 aa25.17■■□□□ 1.62
DDX55-205ENST00000538744 SLC4A3P48751 1232 aa25.17■■□□□ 1.62
DDX55-205ENST00000538744 NUP188Q5SRE5 1749 aa25.16■■□□□ 1.62
DDX55-205ENST00000538744 SDSP20132 328 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 MX1P20591 662 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 PIP4K2BP78356 416 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 GCKRQ14397 625 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 PLBD2Q8NHP8 589 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 KIF1BPQ96EK5 621 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 NBPF26B4DH59 902 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 EXOC5O00471 708 aa25.15■■□□□ 1.62
DDX55-205ENST00000538744 RBM25P49756 843 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms