RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
ACTN1-205ENST00000538545 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-205ENST00000538545 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-205ENST00000538545 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
ACTN1-205ENST00000538545 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-205ENST00000538545 PLEKHM2Q8IWE5 1019 aa17.61■□□□□ 0.41
ACTN1-205ENST00000538545 ADAMTS7Q9UKP4 1686 aa17.6■□□□□ 0.41
ACTN1-205ENST00000538545 SOS1Q07889 1333 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-205ENST00000538545 PKD1L3Q7Z443 1732 aa17.59■□□□□ 0.41
ACTN1-205ENST00000538545 GNAI3P08754 354 aa17.59■□□□□ 0.41
ACTN1-205ENST00000538545 NBR1Q14596 966 aa17.58■□□□□ 0.41
ACTN1-205ENST00000538545 COPS6Q7L5N1 327 aa17.58■□□□□ 0.41
ACTN1-205ENST00000538545 XAGE3Q8WTP9 111 aa17.58■□□□□ 0.41
ACTN1-205ENST00000538545 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
ACTN1-205ENST00000538545 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
ACTN1-205ENST00000538545 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
ACTN1-205ENST00000538545 IL1RAPL2Q9NP60 686 aa17.57■□□□□ 0.4
ACTN1-205ENST00000538545 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
ACTN1-205ENST00000538545 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
ACTN1-205ENST00000538545 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
ACTN1-205ENST00000538545 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
ACTN1-205ENST00000538545 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
ACTN1-205ENST00000538545 HMMRO75330 724 aa17.55■□□□□ 0.4
ACTN1-205ENST00000538545 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
ACTN1-205ENST00000538545 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
ACTN1-205ENST00000538545 SRGAP3O43295 1099 aa17.55■□□□□ 0.4
ACTN1-205ENST00000538545 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-205ENST00000538545 ABCC6O95255 1503 aa17.55■□□□□ 0.4
ACTN1-205ENST00000538545 A0A0G2JS52 829 aa17.54■□□□□ 0.4
ACTN1-205ENST00000538545 A1BGP04217 495 aa17.54■□□□□ 0.4
ACTN1-205ENST00000538545 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
ACTN1-205ENST00000538545 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
ACTN1-205ENST00000538545 HYPKQ9NX55 129 aa17.54■□□□□ 0.4
ACTN1-205ENST00000538545 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
ACTN1-205ENST00000538545 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-205ENST00000538545 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-205ENST00000538545 TBC1D9Q6ZT07 1266 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 SHANK3Q9BYB0 1731 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 MYD88Q99836 296 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
ACTN1-205ENST00000538545 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
ACTN1-205ENST00000538545 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
ACTN1-205ENST00000538545 LRP10Q7Z4F1 713 aa17.53■□□□□ 0.4
ACTN1-205ENST00000538545 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-205ENST00000538545 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
ACTN1-205ENST00000538545 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
ACTN1-205ENST00000538545 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
ACTN1-205ENST00000538545 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
ACTN1-205ENST00000538545 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.39
ACTN1-205ENST00000538545 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 MRC1P22897 1456 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
ACTN1-205ENST00000538545 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
ACTN1-205ENST00000538545 SDSP20132 328 aa17.49■□□□□ 0.39
ACTN1-205ENST00000538545 COL16A1Q07092 1604 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-205ENST00000538545 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
ACTN1-205ENST00000538545 PIGBQ92521 554 aa17.49■□□□□ 0.39
ACTN1-205ENST00000538545 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-205ENST00000538545 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
ACTN1-205ENST00000538545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-205ENST00000538545 PDE1AP54750 535 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 TOGARAM1Q9Y4F4 1720 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 GLI3P10071 1580 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 MAP4K4O95819 1239 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 NKX1-1Q15270 411 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 ERVV-2B6SEH9 535 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
ACTN1-205ENST00000538545 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 LINS1Q8NG48 757 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 ARXQ96QS3 562 aa17.48■□□□□ 0.39
ACTN1-205ENST00000538545 GRM8O00222 908 aa17.47■□□□□ 0.39
ACTN1-205ENST00000538545 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
ACTN1-205ENST00000538545 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
ACTN1-205ENST00000538545 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.39
ACTN1-205ENST00000538545 POLA2Q14181 598 aa17.46■□□□□ 0.39
ACTN1-205ENST00000538545 CHMP4AQ9BY43 222 aa17.46■□□□□ 0.39
ACTN1-205ENST00000538545 SIL1Q9H173 461 aa17.46■□□□□ 0.39
ACTN1-205ENST00000538545 PHLPP1O60346 1717 aa17.46■□□□□ 0.39
ACTN1-205ENST00000538545 UNC5CLQ8IV45 518 aa17.45■□□□□ 0.38
ACTN1-205ENST00000538545 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
ACTN1-205ENST00000538545 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
ACTN1-205ENST00000538545 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
ACTN1-205ENST00000538545 METTL22Q9BUU2 404 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms