RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 ADGRF5Q8IZF2 1346 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 FEZ1Q99689 392 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
LINC00346-201ENST00000538077 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
LINC00346-201ENST00000538077 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
LINC00346-201ENST00000538077 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
LINC00346-201ENST00000538077 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 PLB1Q6P1J6 1458 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 GOLIM4O00461 696 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 ZNF213O14771 459 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 ANXA1P04083 346 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
LINC00346-201ENST00000538077 NLRP5P59047 1200 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 HAND2P61296 217 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 ST5P78524 1137 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
LINC00346-201ENST00000538077 KRT32Q14532 448 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
LINC00346-201ENST00000538077 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
LINC00346-201ENST00000538077 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
LINC00346-201ENST00000538077 DESP17661 470 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
LINC00346-201ENST00000538077 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 CCDC141Q6ZP82 1450 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 LUC7LQ9NQ29 371 aaKnown RBP13.07□□□□□ -0.32
LINC00346-201ENST00000538077 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
LINC00346-201ENST00000538077 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 DNAAF4Q8WXU2 420 aa13.07□□□□□ -0.32
LINC00346-201ENST00000538077 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
LINC00346-201ENST00000538077 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
LINC00346-201ENST00000538077 MMRN2Q9H8L6 949 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 C20orf194Q5TEA3 1177 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 PICALMQ13492 652 aa13.06□□□□□ -0.32
LINC00346-201ENST00000538077 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
LINC00346-201ENST00000538077 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 SSH1Q8WYL5 1049 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 PSMD1Q99460 953 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 TRIM21P19474 475 aaKnown RBP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 NOS1P29475 1434 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 SYCE3A1L190 88 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
LINC00346-201ENST00000538077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00346-201ENST00000538077 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
LINC00346-201ENST00000538077 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 CABLES1Q8TDN4 633 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 TSG101Q99816 390 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
LINC00346-201ENST00000538077 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
LINC00346-201ENST00000538077 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
LINC00346-201ENST00000538077 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
LINC00346-201ENST00000538077 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
LINC00346-201ENST00000538077 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
LINC00346-201ENST00000538077 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
LINC00346-201ENST00000538077 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 TAF4BQ92750 862 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
LINC00346-201ENST00000538077 ZRSR2Q15696 482 aaKnown RBP13.03□□□□□ -0.32
LINC00346-201ENST00000538077 LDHAL6AQ6ZMR3 332 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
LINC00346-201ENST00000538077 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 CPLX3Q8WVH0 158 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
LINC00346-201ENST00000538077 UBE3BQ7Z3V4 1068 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 GOPCQ9HD26 462 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 GRIN2AQ12879 1464 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 SLC39A6Q13433 755 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 IDI1Q13907 227 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms