RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 KDRP35968 1356 aa10.61□□□□□ -0.71
UBE3B-208ENST00000538070 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
UBE3B-208ENST00000538070 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
UBE3B-208ENST00000538070 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
UBE3B-208ENST00000538070 CAVIN1Q6NZI2 390 aaKnown RBP10.61□□□□□ -0.71
UBE3B-208ENST00000538070 ESYT1Q9BSJ8 1104 aa10.61□□□□□ -0.71
UBE3B-208ENST00000538070 MON2Q7Z3U7 1717 aa10.61□□□□□ -0.71
UBE3B-208ENST00000538070 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 DBF4Q9UBU7 674 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-208ENST00000538070 CHMLP26374 656 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 AACSQ86V21 672 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 IL25Q9H293 177 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 RAB3GAP1Q15042 981 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 DIAPH3Q9NSV4 1193 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
UBE3B-208ENST00000538070 BAG4O95429 457 aaKnown RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 CLASRPQ8N2M8 674 aaKnown RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 MYD88Q99836 296 aa10.59□□□□□ -0.71
UBE3B-208ENST00000538070 TATP17735 454 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 G3BP1Q13283 466 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
UBE3B-208ENST00000538070 CCDC85AQ96PX6 553 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 BOLA2Q9H3K6 86 aa10.59□□□□□ -0.71
UBE3B-208ENST00000538070 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-208ENST00000538070 BEND3Q5T5X7 828 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 TMX3Q96JJ7 454 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 AMOTQ4VCS5 1084 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 KIF24Q5T7B8 1368 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 AKAP12Q02952 1782 aa10.58□□□□□ -0.72
UBE3B-208ENST00000538070 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-208ENST00000538070 TCEANC2Q96MN5 208 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 KAT6BQ8WYB5 2073 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 NEXNQ0ZGT2 675 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
UBE3B-208ENST00000538070 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 AK9Q5TCS8 1911 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 GRPEL1Q9HAV7 217 aa10.57□□□□□ -0.72
UBE3B-208ENST00000538070 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 BICC1Q9H694 974 aaKnown RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 KNDC1Q76NI1 1749 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 DDX58O95786 925 aaKnown RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 TOM1L2Q6ZVM7 507 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 FBXO41Q8TF61 875 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 EDC3Q96F86 508 aaKnown RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 SUCLG2Q96I99 432 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 ZNF496Q96IT1 587 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
UBE3B-208ENST00000538070 CABP4P57796 275 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 RNF214Q8ND24 703 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 SSH3Q8TE77 659 aa10.56□□□□□ -0.72
UBE3B-208ENST00000538070 NUCB2P80303 420 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 PRPF40BQ6NWY9 871 aaKnown RBP10.55□□□□□ -0.72
UBE3B-208ENST00000538070 KSR2Q6VAB6 950 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 MPNDQ8N594 471 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 ARHGAP23Q9P227 1491 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
UBE3B-208ENST00000538070 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 NAP1L2Q9ULW6 460 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-208ENST00000538070 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 DNAJC2Q99543 621 aaKnown RBP10.55□□□□□ -0.72
UBE3B-208ENST00000538070 PIK3C2AO00443 1686 aa10.55□□□□□ -0.72
UBE3B-208ENST00000538070 ANP32BQ92688 251 aaKnown RBP10.54□□□□□ -0.72
UBE3B-208ENST00000538070 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 FSD1Q9BTV5 496 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 ANKARQ7Z5J8 1434 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 SLIT1O75093 1534 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
UBE3B-208ENST00000538070 TLR7Q9NYK1 1049 aaKnown RBP10.54□□□□□ -0.72
UBE3B-208ENST00000538070 NRKQ7Z2Y5 1582 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 GRM8O00222 908 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
UBE3B-208ENST00000538070 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-208ENST00000538070 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 RAB11FIP3O75154 756 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 EVA1CP58658 441 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-208ENST00000538070 MRE11P49959 708 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 FOSBP53539 338 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 SYTL4Q96C24 671 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-208ENST00000538070 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
UBE3B-208ENST00000538070 ADCY9O60503 1353 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 STK3Q13188 491 aa10.53□□□□□ -0.72
UBE3B-208ENST00000538070 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms