RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
DDB1-209ENST00000537877 FLIIQ13045 1269 aa15.71■□□□□ 0.11
DDB1-209ENST00000537877 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.11
DDB1-209ENST00000537877 NECTIN2Q92692 538 aa15.71■□□□□ 0.11
DDB1-209ENST00000537877 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
DDB1-209ENST00000537877 ASAP1Q9ULH1 1129 aa15.71■□□□□ 0.11
DDB1-209ENST00000537877 ZNF831Q5JPB2 1677 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 DDX21Q9NR30 783 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDB1-209ENST00000537877 COG6Q9Y2V7 657 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 BRWD3Q6RI45 1802 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 TJP1Q07157 1748 aa15.7■□□□□ 0.1
DDB1-209ENST00000537877 PTCD1O75127 700 aaKnown RBP15.69■□□□□ 0.1
DDB1-209ENST00000537877 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
DDB1-209ENST00000537877 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
DDB1-209ENST00000537877 HYPKQ9NX55 129 aa15.69■□□□□ 0.1
DDB1-209ENST00000537877 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
DDB1-209ENST00000537877 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
DDB1-209ENST00000537877 G2E3Q7L622 706 aa15.68■□□□□ 0.1
DDB1-209ENST00000537877 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
DDB1-209ENST00000537877 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
DDB1-209ENST00000537877 BTAF1O14981 1849 aa15.68■□□□□ 0.1
DDB1-209ENST00000537877 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
DDB1-209ENST00000537877 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
DDB1-209ENST00000537877 CHMP4BQ9H444 224 aaKnown RBP15.67■□□□□ 0.1
DDB1-209ENST00000537877 USP16Q9Y5T5 823 aa15.67■□□□□ 0.1
DDB1-209ENST00000537877 PDIA6Q15084 440 aa15.66■□□□□ 0.1
DDB1-209ENST00000537877 INTS3Q68E01 1043 aaKnown RBP15.66■□□□□ 0.1
DDB1-209ENST00000537877 PALLDQ8WX93 1383 aa15.66■□□□□ 0.1
DDB1-209ENST00000537877 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
DDB1-209ENST00000537877 PHAXQ9H814 394 aaKnown RBP15.65■□□□□ 0.1
DDB1-209ENST00000537877 KCNQ2O43526 872 aa15.64■□□□□ 0.09
DDB1-209ENST00000537877 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
DDB1-209ENST00000537877 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
DDB1-209ENST00000537877 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
DDB1-209ENST00000537877 RREB1Q92766 1687 aa15.64■□□□□ 0.09
DDB1-209ENST00000537877 STARD3NLO95772 234 aa15.63■□□□□ 0.09
DDB1-209ENST00000537877 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
DDB1-209ENST00000537877 ANXA1P04083 346 aa15.63■□□□□ 0.09
DDB1-209ENST00000537877 RXRBP28702 533 aa15.63■□□□□ 0.09
DDB1-209ENST00000537877 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
DDB1-209ENST00000537877 FAM196AQ6ZSG2 479 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 LRP10Q7Z4F1 713 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 ATP10DQ9P241 1426 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 LY75O60449 1722 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 COL5A3P25940 1745 aaPredicted RBP15.62■□□□□ 0.09
DDB1-209ENST00000537877 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 SIK1P57059 783 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 SLC4A9Q96Q91 983 aa15.62■□□□□ 0.09
DDB1-209ENST00000537877 ADCY9O60503 1353 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 F6X3S4 739 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 MYL6BP14649 208 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 B4GALNT3Q6L9W6 998 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 KSR2Q6VAB6 950 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
DDB1-209ENST00000537877 ARFGEF2Q9Y6D5 1785 aa15.61■□□□□ 0.09
DDB1-209ENST00000537877 PI4KAP2A4QPH2 592 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 CYP19A1P11511 503 aaPredicted RBP15.6■□□□□ 0.09
DDB1-209ENST00000537877 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
DDB1-209ENST00000537877 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 PI4KAP1Q8N8J0 262 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
DDB1-209ENST00000537877 ZBTB40Q9NUA8 1239 aa15.6■□□□□ 0.09
DDB1-209ENST00000537877 NUP188Q5SRE5 1749 aa15.59■□□□□ 0.09
DDB1-209ENST00000537877 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
DDB1-209ENST00000537877 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
DDB1-209ENST00000537877 A1BGP04217 495 aa15.59■□□□□ 0.09
DDB1-209ENST00000537877 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
DDB1-209ENST00000537877 POTEAQ6S8J7 498 aa15.58■□□□□ 0.08
DDB1-209ENST00000537877 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
DDB1-209ENST00000537877 AIMP1Q12904 312 aaKnown RBP15.57■□□□□ 0.08
DDB1-209ENST00000537877 SRCIN1Q9C0H9 1055 aa15.57■□□□□ 0.08
DDB1-209ENST00000537877 MAP3K2Q9Y2U5 619 aa15.57■□□□□ 0.08
DDB1-209ENST00000537877 PIP4K2AP48426 406 aaPredicted RBP15.56■□□□□ 0.08
DDB1-209ENST00000537877 BEND3Q5T5X7 828 aa15.56■□□□□ 0.08
DDB1-209ENST00000537877 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
DDB1-209ENST00000537877 PTF1AQ7RTS3 328 aa15.56■□□□□ 0.08
DDB1-209ENST00000537877 RIC3Q7Z5B4 369 aa15.56■□□□□ 0.08
DDB1-209ENST00000537877 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
DDB1-209ENST00000537877 ALDH1L1O75891 902 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
DDB1-209ENST00000537877 ITPK1Q13572 414 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 ZBTB1Q9Y2K1 713 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
DDB1-209ENST00000537877 GNAI3P08754 354 aa15.54■□□□□ 0.08
DDB1-209ENST00000537877 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
DDB1-209ENST00000537877 NEXNQ0ZGT2 675 aa15.54■□□□□ 0.08
DDB1-209ENST00000537877 METTL22Q9BUU2 404 aaPredicted RBP15.54■□□□□ 0.08
DDB1-209ENST00000537877 KDM2BQ8NHM5 1336 aa15.53■□□□□ 0.08
DDB1-209ENST00000537877 CNTNAP4Q9C0A0 1308 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms