RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MYZAPP0CAP1 466 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 FAM76AQ8TAV0 307 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 ZFYP08048 801 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 PTGS1P23219 599 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 KIF3BO15066 747 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 EVC2Q86UK5 1308 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 RIOK3O14730 519 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 VPS37DQ86XT2 251 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 CPLX3Q8WVH0 158 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 NEUROD6Q96NK8 337 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 ATP6V1AP38606 617 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 AMOTL1Q8IY63 956 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 PUS7Q96PZ0 661 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 CTAGE9A4FU28 777 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 OPA1O60313 960 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 CAVIN2O95810 425 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 UBE2HP62256 183 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 GTF2E1P29083 439 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 USO1O60763 962 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 CKAP4Q07065 602 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 TRIM22Q8IYM9 498 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 PLEKHH2Q8IVE3 1493 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 NUP214P35658 2090 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 DDX58O95786 925 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 SUPT6HQ7KZ85 1726 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 STAMBPO95630 424 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 ZBTB16Q05516 673 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC186Q7Z3E2 898 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 ALS2CR12Q96Q35 445 aa6.54□□□□□ -1.36
CSMD1-215ENST00000537824 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-215ENST00000537824 ANO6Q4KMQ2 910 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 C1orf141Q5JVX7 400 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 TCP11L2Q8N4U5 519 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 AFAP1L1Q8TED9 768 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 TERF1P54274 439 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 PPP2R1AP30153 589 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 WDR63Q8IWG1 891 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 RNF168Q8IYW5 571 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 TEFQ10587 303 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC129Q6ZRS4 1044 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 ZBTB12Q9Y330 459 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 GNAI3P08754 354 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 TYRO3Q06418 890 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 PDE1CQ14123 709 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 RHOXF2BP0C7M4 288 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 EXOSC9Q06265 439 aaKnown RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 NUTM2DQ5VT03 806 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 DDX54Q8TDD1 881 aaKnown RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 TSC1Q92574 1164 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 COG3Q96JB2 828 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 RHOXF2Q9BQY4 288 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC50Q8IVM0 306 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 SIL1Q9H173 461 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 ELF2Q15723 593 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 DDX19AQ9NUU7 478 aaKnown RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 CTNNBL1Q8WYA6 563 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-215ENST00000537824 JADE2Q9NQC1 790 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 CNPY2Q9Y2B0 182 aa6.53□□□□□ -1.36
CSMD1-215ENST00000537824 G3V3G9 751 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 DCAF8Q5TAQ9 597 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 KNTC1P50748 2209 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 KIF3CO14782 793 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 TMEM57Q8N5G2 664 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 YEATS4O95619 227 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 ZNF365Q70YC5 407 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CCDC155Q8N6L0 562 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 ERO1AQ96HE7 468 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 RABEP2Q9H5N1 569 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 ZSCAN26Q16670 478 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 POTEDQ86YR6 584 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 LMNTD2Q8IXW0 634 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 MKRN1Q9UHC7 482 aaKnown RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 DNAJC13O75165 2243 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 MIA2Q96PC5 1412 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CPLX4Q7Z7G2 160 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CAPZA3Q96KX2 299 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 FSD2A1L4K1 749 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 SLC3A2P08195 630 aaKnown RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 SEPT14Q6ZU15 432 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 NOL7Q9UMY1 257 aaKnown RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 MINK1Q8N4C8 1332 aaPredicted RBP6.52□□□□□ -1.37
CSMD1-215ENST00000537824 FRMD3A2A2Y4 597 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CDKL5O76039 1030 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 FKBP15Q5T1M5 1219 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 SRCIN1Q9C0H9 1055 aa6.52□□□□□ -1.37
CSMD1-215ENST00000537824 CCDC69A6NI79 296 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms