RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
GGA3-201ENST00000537686 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 A0A087WZG4 1122 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 TDO2P48775 406 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 RAB11FIP3O75154 756 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 KRT32Q14532 448 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 CADPS2Q86UW7 1296 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 BRPF3Q9ULD4 1205 aa11.94□□□□□ -0.5
GGA3-201ENST00000537686 IGHMBP2P38935 993 aaKnown RBP11.93□□□□□ -0.5
GGA3-201ENST00000537686 JMYQ8N9B5 988 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 FAM13BQ9NYF5 915 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
GGA3-201ENST00000537686 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 PPP1R1BQ9UD71 204 aaPredicted RBP11.93□□□□□ -0.5
GGA3-201ENST00000537686 ROBO2Q9HCK4 1378 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 TSPY26PQ9H489 355 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
GGA3-201ENST00000537686 PTPRCP08575 1304 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 IGHDP01880 384 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 MPNDQ8N594 471 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 PDILTQ8N807 584 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 DDX11Q96FC9 970 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
GGA3-201ENST00000537686 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
GGA3-201ENST00000537686 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
GGA3-201ENST00000537686 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 IL16Q14005 1332 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 NLRP1Q9C000 1473 aa11.92□□□□□ -0.5
GGA3-201ENST00000537686 LETM1O95202 739 aaPredicted RBP11.91□□□□□ -0.5
GGA3-201ENST00000537686 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
GGA3-201ENST00000537686 KDM5AP29375 1690 aaKnown RBP11.91□□□□□ -0.5
GGA3-201ENST00000537686 AGLP35573 1532 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 GPTP24298 496 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
GGA3-201ENST00000537686 UBE3BQ7Z3V4 1068 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 OFD1O75665 1012 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 TXLNAP40222 546 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
GGA3-201ENST00000537686 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
GGA3-201ENST00000537686 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
GGA3-201ENST00000537686 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 SMC2O95347 1197 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 TNMDQ9H2S6 317 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 MAP3K2Q9Y2U5 619 aa11.9□□□□□ -0.5
GGA3-201ENST00000537686 EXOC5O00471 708 aa11.9□□□□□ -0.51
GGA3-201ENST00000537686 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.51
GGA3-201ENST00000537686 CCDC83Q8IWF9 413 aa11.9□□□□□ -0.51
GGA3-201ENST00000537686 MEIS3Q99687 375 aa11.9□□□□□ -0.51
GGA3-201ENST00000537686 CLTCQ00610 1675 aaKnown RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
GGA3-201ENST00000537686 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
GGA3-201ENST00000537686 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
GGA3-201ENST00000537686 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 MNS1Q8NEH6 495 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 NAP1L1P55209 391 aaKnown RBP11.88□□□□□ -0.51
GGA3-201ENST00000537686 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 SF3B2Q13435 895 aaKnown RBP11.88□□□□□ -0.51
GGA3-201ENST00000537686 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
GGA3-201ENST00000537686 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
GGA3-201ENST00000537686 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
GGA3-201ENST00000537686 MAP3K19Q56UN5 1328 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms