RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 STX6O43752 255 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 PTGS1P23219 599 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 FAM193AP78312 1265 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 G2E3Q7L622 706 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 PLA2G4DQ86XP0 818 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 TDRD7Q8NHU6 1098 aaKnown RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 UPF3BQ9BZI7 483 aaKnown RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 STK26Q9P289 416 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 CGNQ9P2M7 1197 aaKnown RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 MRVI1Q9Y6F6 885 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 CFAP65Q6ZU64 1925 aaKnown RBP8.3□□□□□ -1.08
CPSF7-215ENST00000536145 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 AKAP12Q02952 1782 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 CCDC171Q6TFL3 1326 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 ADGRL3Q9HAR2 1447 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 TCHHQ07283 1943 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 GOLGA6L6A8MZA4 724 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 SGSM2O43147 1006 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 LARGE1O95461 756 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 GNAI2P04899 355 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 CDC25BP30305 580 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 ZNF75DP51815 510 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 AK2P54819 239 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 CREBRFQ8IUR6 639 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 KIF18AQ8NI77 898 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 LRRCC1Q9C099 1032 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 KCND1Q9NSA2 647 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 SLC52A1Q9NWF4 448 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 ZRANB1Q9UGI0 708 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 LIMCH1Q9UPQ0 1083 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 ELP1O95163 1332 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
CPSF7-215ENST00000536145 USP42Q9H9J4 1324 aaKnown RBP8.29□□□□□ -1.08
CPSF7-215ENST00000536145 FAM208AQ9UK61 1670 aaKnown RBP8.28□□□□□ -1.08
CPSF7-215ENST00000536145 PXDNLA1KZ92 1463 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 APBB1O00213 710 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 CCDC192P0DO97 292 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 CHAF1AQ13111 956 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-215ENST00000536145 TERF2Q15554 542 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 NOL8Q76FK4 1167 aaKnown RBP8.28□□□□□ -1.08
CPSF7-215ENST00000536145 NME9Q86XW9 330 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 AEBP1Q8IUX7 1158 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 PI4K2BQ8TCG2 481 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 EXOC6BQ9Y2D4 811 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-215ENST00000536145 PAXBP1Q9Y5B6 917 aa8.28□□□□□ -1.08
CPSF7-215ENST00000536145 CHD2O14647 1828 aaKnown RBP8.28□□□□□ -1.08
CPSF7-215ENST00000536145 PEAK1Q9H792 1746 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 RAPGEF3O95398 923 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 RBM6P78332 1123 aaKnown RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 DNM1Q05193 864 aaKnown RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 TYRO3Q06418 890 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 SLC20A2Q08357 652 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 POLA2Q14181 598 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 NAA30Q147X3 362 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 ZSCAN25Q6NSZ9 544 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 GGT6Q6P531 493 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 NYAP1Q6ZVC0 841 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 CCDC186Q7Z3E2 898 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 ZNF397Q8NF99 534 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 ZSCAN31Q96LW9 406 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-215ENST00000536145 TM6SF1Q9BZW5 370 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 CBX8Q9HC52 389 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 ATP6V1DQ9Y5K8 247 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 TTC21BQ7Z4L5 1316 aa8.27□□□□□ -1.09
CPSF7-215ENST00000536145 TULP2O00295 520 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 FIBPO43427 364 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 IGSF3O75054 1194 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 SLC4A2P04920 1241 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 GNAI3P08754 354 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 TNNT1P13805 278 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 LIG1P18858 919 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 LRMPQ12912 555 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 EIF4A2Q14240 407 aaKnown RBP8.26□□□□□ -1.09
CPSF7-215ENST00000536145 SARM1Q6SZW1 724 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 SPC24Q8NBT2 197 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 SSH3Q8TE77 659 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 CACTINQ8WUQ7 758 aaKnown RBP8.26□□□□□ -1.09
CPSF7-215ENST00000536145 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
CPSF7-215ENST00000536145 HYPKQ9NX55 129 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 SMC3Q9UQE7 1217 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 NALCNQ8IZF0 1738 aa8.26□□□□□ -1.09
CPSF7-215ENST00000536145 F6X3S4 739 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 RAB11FIP3O75154 756 aa8.25□□□□□ -1.09
CPSF7-215ENST00000536145 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms