RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-207ENST00000535958 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-207ENST00000535958 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-207ENST00000535958 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-207ENST00000535958 NARFQ9UHQ1 456 aa17.52■□□□□ 0.4
TNFRSF1A-207ENST00000535958 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
TNFRSF1A-207ENST00000535958 WDR90Q96KV7 1748 aa17.52■□□□□ 0.39
TNFRSF1A-207ENST00000535958 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.39
TNFRSF1A-207ENST00000535958 TM4SF1P30408 202 aa17.51■□□□□ 0.39
TNFRSF1A-207ENST00000535958 FSTL1Q12841 308 aa17.51■□□□□ 0.39
TNFRSF1A-207ENST00000535958 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-207ENST00000535958 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-207ENST00000535958 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 STARD3NLO95772 234 aa17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 NFIXQ14938 502 aa17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
TNFRSF1A-207ENST00000535958 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 A0A087WZG4 1122 aa17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 SERPINB2P05120 415 aa17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 TEFQ10587 303 aa17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
TNFRSF1A-207ENST00000535958 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 RASSF7Q02833 373 aa17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 CNGB1Q14028 1251 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-207ENST00000535958 H0YIN7 160 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 NPHP1O15259 732 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 LMNB1P20700 586 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 DLEC1Q9Y238 1755 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
TNFRSF1A-207ENST00000535958 SBF1O95248 1867 aa17.46■□□□□ 0.39
TNFRSF1A-207ENST00000535958 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
TNFRSF1A-207ENST00000535958 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
TNFRSF1A-207ENST00000535958 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-207ENST00000535958 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
TNFRSF1A-207ENST00000535958 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
TNFRSF1A-207ENST00000535958 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
TNFRSF1A-207ENST00000535958 DNAJC5GQ8N7S2 189 aa17.43■□□□□ 0.38
TNFRSF1A-207ENST00000535958 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
TNFRSF1A-207ENST00000535958 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
TNFRSF1A-207ENST00000535958 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 CARMIL3Q8ND23 1372 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 PDE6BP35913 854 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 HTRA3P83110 453 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
TNFRSF1A-207ENST00000535958 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 VEGFAP15692 232 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 EIF5P55010 431 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 FMNL2Q96PY5 1086 aa17.41■□□□□ 0.38
TNFRSF1A-207ENST00000535958 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-207ENST00000535958 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
TNFRSF1A-207ENST00000535958 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
TNFRSF1A-207ENST00000535958 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 ST5P78524 1137 aa17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
TNFRSF1A-207ENST00000535958 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
TNFRSF1A-207ENST00000535958 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
TNFRSF1A-207ENST00000535958 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-207ENST00000535958 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
TNFRSF1A-207ENST00000535958 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
TNFRSF1A-207ENST00000535958 NFKBIEO00221 500 aa17.37■□□□□ 0.37
TNFRSF1A-207ENST00000535958 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
TNFRSF1A-207ENST00000535958 IL17REQ8NFR9 667 aa17.37■□□□□ 0.37
TNFRSF1A-207ENST00000535958 C21orf2O43822 256 aa17.36■□□□□ 0.37
TNFRSF1A-207ENST00000535958 ERFEQ4G0M1 354 aa17.36■□□□□ 0.37
TNFRSF1A-207ENST00000535958 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
TNFRSF1A-207ENST00000535958 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-207ENST00000535958 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
TNFRSF1A-207ENST00000535958 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 TAOK3Q9H2K8 898 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-207ENST00000535958 BCORQ6W2J9 1755 aa17.33■□□□□ 0.37
TNFRSF1A-207ENST00000535958 A1BGP04217 495 aa17.33■□□□□ 0.36
TNFRSF1A-207ENST00000535958 PRELPP51888 382 aa17.33■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CACNA1SQ13698 1873 aa17.33■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
TNFRSF1A-207ENST00000535958 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-207ENST00000535958 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms