RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
DDB1-205ENST00000535174 KCPQ6ZWJ8 1503 aa22.37■■□□□ 1.17
DDB1-205ENST00000535174 BRCA1P38398 1863 aaKnown RBP22.37■■□□□ 1.17
DDB1-205ENST00000535174 SLC39A6Q13433 755 aa22.37■■□□□ 1.17
DDB1-205ENST00000535174 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
DDB1-205ENST00000535174 U2SURPO15042 1029 aaKnown RBP22.36■■□□□ 1.17
DDB1-205ENST00000535174 DPEP1P16444 411 aa22.36■■□□□ 1.17
DDB1-205ENST00000535174 FCHSD2O94868 740 aa22.35■■□□□ 1.17
DDB1-205ENST00000535174 FKBP8Q14318 412 aa22.35■■□□□ 1.17
DDB1-205ENST00000535174 UBR2Q8IWV8 1755 aa22.35■■□□□ 1.17
DDB1-205ENST00000535174 ZPR1O75312 459 aa22.34■■□□□ 1.17
DDB1-205ENST00000535174 INTS5Q6P9B9 1019 aaKnown RBP22.34■■□□□ 1.17
DDB1-205ENST00000535174 COL15A1P39059 1388 aa22.33■■□□□ 1.17
DDB1-205ENST00000535174 ARFGEF1Q9Y6D6 1849 aa22.33■■□□□ 1.16
DDB1-205ENST00000535174 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
DDB1-205ENST00000535174 DDR1Q08345 913 aa22.32■■□□□ 1.16
DDB1-205ENST00000535174 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
DDB1-205ENST00000535174 TTC5Q8N0Z6 440 aa22.32■■□□□ 1.16
DDB1-205ENST00000535174 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
DDB1-205ENST00000535174 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
DDB1-205ENST00000535174 ZBTB1Q9Y2K1 713 aa22.3■■□□□ 1.16
DDB1-205ENST00000535174 TEFQ10587 303 aa22.29■■□□□ 1.16
DDB1-205ENST00000535174 NCBP3Q53F19 620 aaKnown RBP22.29■■□□□ 1.16
DDB1-205ENST00000535174 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
DDB1-205ENST00000535174 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
DDB1-205ENST00000535174 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
DDB1-205ENST00000535174 PIM2Q9P1W9 311 aa22.29■■□□□ 1.16
DDB1-205ENST00000535174 POLRMTO00411 1230 aaKnown RBP22.28■■□□□ 1.16
DDB1-205ENST00000535174 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
DDB1-205ENST00000535174 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
DDB1-205ENST00000535174 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
DDB1-205ENST00000535174 SIPA1L3O60292 1781 aaPredicted RBP22.27■■□□□ 1.16
DDB1-205ENST00000535174 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.15
DDB1-205ENST00000535174 GNAT3A8MTJ3 354 aa22.26■■□□□ 1.15
DDB1-205ENST00000535174 DALRD3Q5D0E6 543 aaKnown RBP22.26■■□□□ 1.15
DDB1-205ENST00000535174 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
DDB1-205ENST00000535174 KCNA3P22001 575 aa22.25■■□□□ 1.15
DDB1-205ENST00000535174 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
DDB1-205ENST00000535174 CHRNA5P30532 468 aa22.25■■□□□ 1.15
DDB1-205ENST00000535174 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
DDB1-205ENST00000535174 STARD3NLO95772 234 aa22.24■■□□□ 1.15
DDB1-205ENST00000535174 TM4SF1P30408 202 aa22.24■■□□□ 1.15
DDB1-205ENST00000535174 NRXN2Q9P2S2 1712 aa22.23■■□□□ 1.15
DDB1-205ENST00000535174 APAF1O14727 1248 aa22.23■■□□□ 1.15
DDB1-205ENST00000535174 NFIXQ14938 502 aa22.23■■□□□ 1.15
DDB1-205ENST00000535174 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
DDB1-205ENST00000535174 KIF3CO14782 793 aa22.22■■□□□ 1.15
DDB1-205ENST00000535174 HSPA6P17066 643 aa22.22■■□□□ 1.15
DDB1-205ENST00000535174 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
DDB1-205ENST00000535174 ZNF521Q96K83 1311 aa22.22■■□□□ 1.15
DDB1-205ENST00000535174 HEG1Q9ULI3 1381 aa22.22■■□□□ 1.15
DDB1-205ENST00000535174 DLEC1Q9Y238 1755 aa22.21■■□□□ 1.15
DDB1-205ENST00000535174 PRKAR2BP31323 418 aa22.21■■□□□ 1.15
DDB1-205ENST00000535174 C9orf131Q5VYM1 1079 aa22.21■■□□□ 1.15
DDB1-205ENST00000535174 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
DDB1-205ENST00000535174 ZNF496Q96IT1 587 aaPredicted RBP22.21■■□□□ 1.15
DDB1-205ENST00000535174 IL17REQ8NFR9 667 aa22.2■■□□□ 1.14
DDB1-205ENST00000535174 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
DDB1-205ENST00000535174 A0A087WZG4 1122 aa22.19■■□□□ 1.14
DDB1-205ENST00000535174 SERPINB2P05120 415 aa22.19■■□□□ 1.14
DDB1-205ENST00000535174 BICDL1Q6ZP65 573 aa22.19■■□□□ 1.14
DDB1-205ENST00000535174 CEP350Q5VT06 3117 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
DDB1-205ENST00000535174 FMNL2Q96PY5 1086 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 PLEKHF1Q96S99 279 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
DDB1-205ENST00000535174 RSPH6AQ9H0K4 717 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 BCL2L12Q9HB09 334 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 RNF181Q9P0P0 153 aa22.18■■□□□ 1.14
DDB1-205ENST00000535174 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
DDB1-205ENST00000535174 CEMIPQ8WUJ3 1361 aa22.17■■□□□ 1.14
DDB1-205ENST00000535174 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
DDB1-205ENST00000535174 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
DDB1-205ENST00000535174 EIF5P55010 431 aaKnown RBP22.16■■□□□ 1.14
DDB1-205ENST00000535174 PHACTR3Q96KR7 559 aa22.16■■□□□ 1.14
DDB1-205ENST00000535174 NMRK2Q9NPI5 230 aa22.16■■□□□ 1.14
DDB1-205ENST00000535174 CARMIL3Q8ND23 1372 aa22.15■■□□□ 1.14
DDB1-205ENST00000535174 NEFMP07197 916 aa22.15■■□□□ 1.14
DDB1-205ENST00000535174 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
DDB1-205ENST00000535174 TOMM70O94826 608 aa22.14■■□□□ 1.13
DDB1-205ENST00000535174 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
DDB1-205ENST00000535174 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
DDB1-205ENST00000535174 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.13
DDB1-205ENST00000535174 SBF1O95248 1867 aa22.13■■□□□ 1.13
DDB1-205ENST00000535174 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
DDB1-205ENST00000535174 BCORQ6W2J9 1755 aa22.13■■□□□ 1.13
DDB1-205ENST00000535174 IL6STP40189 918 aaPredicted RBP22.13■■□□□ 1.13
DDB1-205ENST00000535174 C2CD5Q86YS7 1000 aa22.13■■□□□ 1.13
DDB1-205ENST00000535174 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
DDB1-205ENST00000535174 DLG5Q8TDM6 1919 aa22.12■■□□□ 1.13
DDB1-205ENST00000535174 H0YIN7 160 aa22.12■■□□□ 1.13
DDB1-205ENST00000535174 RASSF7Q02833 373 aa22.12■■□□□ 1.13
DDB1-205ENST00000535174 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
DDB1-205ENST00000535174 ANKRD31Q8N7Z5 1873 aa22.11■■□□□ 1.13
DDB1-205ENST00000535174 NPHP1O15259 732 aa22.11■■□□□ 1.13
DDB1-205ENST00000535174 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
DDB1-205ENST00000535174 TTLL6Q8N841 843 aa22.11■■□□□ 1.13
DDB1-205ENST00000535174 TIAM2Q8IVF5 1701 aa22.11■■□□□ 1.13
DDB1-205ENST00000535174 KCNQ3O43525 872 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms