RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 INTS3Q68E01 1043 aaKnown RBP25.77■■□□□ 1.72
TNFRSF1A-205ENST00000534885 ZBTB40Q9NUA8 1239 aa25.77■■□□□ 1.72
TNFRSF1A-205ENST00000534885 ZBTB7BO15156 539 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF1A-205ENST00000534885 USP16Q9Y5T5 823 aa25.76■■□□□ 1.71
TNFRSF1A-205ENST00000534885 PTCD1O75127 700 aaKnown RBP25.76■■□□□ 1.71
TNFRSF1A-205ENST00000534885 BCL9O00512 1426 aa25.76■■□□□ 1.71
TNFRSF1A-205ENST00000534885 LAMB4A4D0S4 1761 aa25.75■■□□□ 1.71
TNFRSF1A-205ENST00000534885 ASAP1Q9ULH1 1129 aa25.75■■□□□ 1.71
TNFRSF1A-205ENST00000534885 SLC4A10Q6U841 1118 aa25.75■■□□□ 1.71
TNFRSF1A-205ENST00000534885 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF1A-205ENST00000534885 PDIA6Q15084 440 aa25.74■■□□□ 1.71
TNFRSF1A-205ENST00000534885 IGHDP01880 384 aa25.73■■□□□ 1.71
TNFRSF1A-205ENST00000534885 PRIM1P49642 420 aaKnown RBP25.73■■□□□ 1.71
TNFRSF1A-205ENST00000534885 THSD7AQ9UPZ6 1657 aa25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 A0A0G2JS52 829 aa25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 GJD4Q96KN9 370 aaPredicted RBP25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 DDX21Q9NR30 783 aaKnown RBP eCLIP25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 CENPQQ7L2Z9 268 aaPredicted RBP25.72■■□□□ 1.71
TNFRSF1A-205ENST00000534885 ATRNO75882 1429 aa25.71■■□□□ 1.71
TNFRSF1A-205ENST00000534885 ACSBG1Q96GR2 724 aa25.7■■□□□ 1.7
TNFRSF1A-205ENST00000534885 HYPKQ9NX55 129 aa25.7■■□□□ 1.7
TNFRSF1A-205ENST00000534885 N4BP2Q86UW6 1770 aaPredicted RBP25.69■■□□□ 1.7
TNFRSF1A-205ENST00000534885 PIP4K2AP48426 406 aaPredicted RBP25.69■■□□□ 1.7
TNFRSF1A-205ENST00000534885 MYL6BP14649 208 aa25.68■■□□□ 1.7
TNFRSF1A-205ENST00000534885 CCT4P50991 539 aaKnown RBP25.68■■□□□ 1.7
TNFRSF1A-205ENST00000534885 TRPC5Q9UL62 973 aaPredicted RBP25.68■■□□□ 1.7
TNFRSF1A-205ENST00000534885 CHMP4BQ9H444 224 aaKnown RBP25.68■■□□□ 1.7
TNFRSF1A-205ENST00000534885 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
TNFRSF1A-205ENST00000534885 PI4KAP2A4QPH2 592 aa25.67■■□□□ 1.7
TNFRSF1A-205ENST00000534885 PI4KAP1Q8N8J0 262 aa25.67■■□□□ 1.7
TNFRSF1A-205ENST00000534885 PXDNLA1KZ92 1463 aa25.67■■□□□ 1.7
TNFRSF1A-205ENST00000534885 ADCY9O60503 1353 aa25.67■■□□□ 1.7
TNFRSF1A-205ENST00000534885 LRP10Q7Z4F1 713 aa25.66■■□□□ 1.7
TNFRSF1A-205ENST00000534885 MEIS3Q99687 375 aa25.65■■□□□ 1.7
TNFRSF1A-205ENST00000534885 AIMP1Q12904 312 aaKnown RBP25.65■■□□□ 1.7
TNFRSF1A-205ENST00000534885 RBM42Q9BTD8 480 aaKnown RBP25.64■■□□□ 1.7
TNFRSF1A-205ENST00000534885 DNAAF4Q8WXU2 420 aa25.64■■□□□ 1.69
TNFRSF1A-205ENST00000534885 QTRT2Q9H974 415 aaKnown RBP25.64■■□□□ 1.69
TNFRSF1A-205ENST00000534885 SKAP1Q86WV1 359 aa25.63■■□□□ 1.69
TNFRSF1A-205ENST00000534885 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 KCNQ2O43526 872 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 NBPF14Q5TI25 921 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 NBPF10Q6P3W6 841 aaKnown RBP25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 NBPF15Q8N660 670 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 XAGE3Q8WTP9 111 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 SLC4A9Q96Q91 983 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 MAP3K2Q9Y2U5 619 aa25.62■■□□□ 1.69
TNFRSF1A-205ENST00000534885 A1BGP04217 495 aa25.61■■□□□ 1.69
TNFRSF1A-205ENST00000534885 KSR2Q6VAB6 950 aa25.61■■□□□ 1.69
TNFRSF1A-205ENST00000534885 VSIG10Q8N0Z9 540 aa25.61■■□□□ 1.69
TNFRSF1A-205ENST00000534885 ONECUT3O60422 494 aaPredicted RBP25.6■■□□□ 1.69
TNFRSF1A-205ENST00000534885 HDAC1Q13547 482 aaPredicted RBP25.6■■□□□ 1.69
TNFRSF1A-205ENST00000534885 COPS6Q7L5N1 327 aa25.6■■□□□ 1.69
TNFRSF1A-205ENST00000534885 DNAJC10Q8IXB1 793 aa25.6■■□□□ 1.69
TNFRSF1A-205ENST00000534885 ERBB4Q15303 1308 aa25.6■■□□□ 1.69
TNFRSF1A-205ENST00000534885 FAM182BQ5T319 152 aa25.59■■□□□ 1.69
TNFRSF1A-205ENST00000534885 BEND3Q5T5X7 828 aa25.59■■□□□ 1.69
TNFRSF1A-205ENST00000534885 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
TNFRSF1A-205ENST00000534885 SRCIN1Q9C0H9 1055 aa25.59■■□□□ 1.69
TNFRSF1A-205ENST00000534885 SIRT2Q8IXJ6 389 aa25.57■■□□□ 1.68
TNFRSF1A-205ENST00000534885 SEPT12Q8IYM1 358 aa25.57■■□□□ 1.68
TNFRSF1A-205ENST00000534885 ATP10DQ9P241 1426 aa25.57■■□□□ 1.68
TNFRSF1A-205ENST00000534885 TJP1Q07157 1748 aa25.56■■□□□ 1.68
TNFRSF1A-205ENST00000534885 TEX13AQ9BXU3 409 aaPredicted RBP25.56■■□□□ 1.68
TNFRSF1A-205ENST00000534885 USP44Q9H0E7 712 aa25.56■■□□□ 1.68
TNFRSF1A-205ENST00000534885 RIC3Q7Z5B4 369 aa25.55■■□□□ 1.68
TNFRSF1A-205ENST00000534885 ANKRD13DQ6ZTN6 518 aa25.54■■□□□ 1.68
TNFRSF1A-205ENST00000534885 PTF1AQ7RTS3 328 aa25.54■■□□□ 1.68
TNFRSF1A-205ENST00000534885 ARFGEF2Q9Y6D5 1785 aa25.53■■□□□ 1.68
TNFRSF1A-205ENST00000534885 STARD3NLO95772 234 aa25.53■■□□□ 1.68
TNFRSF1A-205ENST00000534885 PALLDQ8WX93 1383 aa25.53■■□□□ 1.68
TNFRSF1A-205ENST00000534885 GNAI3P08754 354 aa25.52■■□□□ 1.68
TNFRSF1A-205ENST00000534885 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
TNFRSF1A-205ENST00000534885 CWF19L2Q2TBE0 894 aaKnown RBP25.52■■□□□ 1.68
TNFRSF1A-205ENST00000534885 CEP85Q6P2H3 762 aa25.52■■□□□ 1.68
TNFRSF1A-205ENST00000534885 TTLL7Q6ZT98 887 aa25.51■■□□□ 1.67
TNFRSF1A-205ENST00000534885 EP400Q96L91 3159 aa25.51■■□□□ 1.67
TNFRSF1A-205ENST00000534885 NHSQ6T4R5 1651 aa25.51■■□□□ 1.67
TNFRSF1A-205ENST00000534885 GNAI2P04899 355 aa25.51■■□□□ 1.67
TNFRSF1A-205ENST00000534885 LOC102724428A0A0B4J2F2 783 aa25.5■■□□□ 1.67
TNFRSF1A-205ENST00000534885 SIK1P57059 783 aa25.5■■□□□ 1.67
TNFRSF1A-205ENST00000534885 ANKRD44Q8N8A2 993 aa25.5■■□□□ 1.67
TNFRSF1A-205ENST00000534885 LINS1Q8NG48 757 aa25.5■■□□□ 1.67
TNFRSF1A-205ENST00000534885 SMC5Q8IY18 1101 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 METTL22Q9BUU2 404 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 BTAF1O14981 1849 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 SBF2Q86WG5 1849 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 ALDH1L1O75891 902 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 IGKV5-2P06315 115 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 UBTFL1P0CB47 393 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 RPAP2Q8IXW5 612 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 PLBD2Q8NHP8 589 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 BRWD3Q6RI45 1802 aa25.49■■□□□ 1.67
TNFRSF1A-205ENST00000534885 NUP188Q5SRE5 1749 aa25.48■■□□□ 1.67
TNFRSF1A-205ENST00000534885 ATP6V1AP38606 617 aa25.48■■□□□ 1.67
TNFRSF1A-205ENST00000534885 PDZRN3Q9UPQ7 1066 aa25.48■■□□□ 1.67
TNFRSF1A-205ENST00000534885 ZNF330Q9Y3S2 320 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms