RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 ADAMTS7Q9UKP4 1686 aa16.82■□□□□ 0.28
SCUBE2-213ENST00000534295 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
SCUBE2-213ENST00000534295 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
SCUBE2-213ENST00000534295 SLC52A2Q9HAB3 445 aa16.82■□□□□ 0.28
SCUBE2-213ENST00000534295 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
SCUBE2-213ENST00000534295 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
SCUBE2-213ENST00000534295 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
SCUBE2-213ENST00000534295 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
SCUBE2-213ENST00000534295 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
SCUBE2-213ENST00000534295 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
SCUBE2-213ENST00000534295 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
SCUBE2-213ENST00000534295 WDR90Q96KV7 1748 aa16.79■□□□□ 0.28
SCUBE2-213ENST00000534295 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
SCUBE2-213ENST00000534295 HMOX1P09601 288 aa16.79■□□□□ 0.28
SCUBE2-213ENST00000534295 NFIXQ14938 502 aa16.79■□□□□ 0.28
SCUBE2-213ENST00000534295 SMC1BQ8NDV3 1235 aa16.79■□□□□ 0.28
SCUBE2-213ENST00000534295 HTRA3P83110 453 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 RALBP1Q15311 655 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 SBF1O95248 1867 aa16.78■□□□□ 0.28
SCUBE2-213ENST00000534295 MRC1P22897 1456 aa16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 GLTPD2A6NH11 291 aa16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 DIAPH1O60610 1272 aaKnown RBP16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 LMNB1P20700 586 aa16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 PRELPP51888 382 aa16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 COL13A1Q5TAT6 717 aaPredicted RBP16.76■□□□□ 0.27
SCUBE2-213ENST00000534295 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
SCUBE2-213ENST00000534295 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
SCUBE2-213ENST00000534295 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
SCUBE2-213ENST00000534295 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
SCUBE2-213ENST00000534295 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SCUBE2-213ENST00000534295 SERPINB2P05120 415 aa16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 RASSF7Q02833 373 aa16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
SCUBE2-213ENST00000534295 STARD3NLO95772 234 aa16.73■□□□□ 0.27
SCUBE2-213ENST00000534295 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
SCUBE2-213ENST00000534295 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
SCUBE2-213ENST00000534295 A0A087WZG4 1122 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 POTECB2RU33 542 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 H0YIN7 160 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 NFKBIEO00221 500 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 TEFQ10587 303 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
SCUBE2-213ENST00000534295 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
SCUBE2-213ENST00000534295 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
SCUBE2-213ENST00000534295 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
SCUBE2-213ENST00000534295 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
SCUBE2-213ENST00000534295 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 ANP32CO43423 234 aa16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 TEX13AQ9BXU3 409 aaPredicted RBP16.69■□□□□ 0.26
SCUBE2-213ENST00000534295 GNAT3A8MTJ3 354 aa16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 BRIP1Q9BX63 1249 aa16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 UBR2Q8IWV8 1755 aa16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 DLEC1Q9Y238 1755 aa16.68■□□□□ 0.26
SCUBE2-213ENST00000534295 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
SCUBE2-213ENST00000534295 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
SCUBE2-213ENST00000534295 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
SCUBE2-213ENST00000534295 PDE6BP35913 854 aa16.66■□□□□ 0.26
SCUBE2-213ENST00000534295 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
SCUBE2-213ENST00000534295 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCUBE2-213ENST00000534295 ZNF496Q96IT1 587 aaPredicted RBP16.66■□□□□ 0.26
SCUBE2-213ENST00000534295 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
SCUBE2-213ENST00000534295 NPHP1O15259 732 aa16.65■□□□□ 0.26
SCUBE2-213ENST00000534295 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
SCUBE2-213ENST00000534295 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
SCUBE2-213ENST00000534295 TNS4Q8IZW8 715 aa16.65■□□□□ 0.26
SCUBE2-213ENST00000534295 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
SCUBE2-213ENST00000534295 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.26
SCUBE2-213ENST00000534295 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-213ENST00000534295 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
SCUBE2-213ENST00000534295 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
SCUBE2-213ENST00000534295 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
SCUBE2-213ENST00000534295 HSPA1AP0DMV8 641 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-213ENST00000534295 HSPA1BP0DMV9 641 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-213ENST00000534295 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
SCUBE2-213ENST00000534295 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SCUBE2-213ENST00000534295 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SCUBE2-213ENST00000534295 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
SCUBE2-213ENST00000534295 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 C21orf2O43822 256 aa16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
SCUBE2-213ENST00000534295 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 A1BGP04217 495 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 ST5P78524 1137 aa16.6■□□□□ 0.25
SCUBE2-213ENST00000534295 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms