RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
CTSB-227ENST00000533110 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
CTSB-227ENST00000533110 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
CTSB-227ENST00000533110 H0YIN7 160 aa12.8□□□□□ -0.36
CTSB-227ENST00000533110 VEGFBP49765 207 aa12.8□□□□□ -0.36
CTSB-227ENST00000533110 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
CTSB-227ENST00000533110 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 TMEM88BA6NKF7 163 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 NFIXQ14938 502 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
CTSB-227ENST00000533110 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
CTSB-227ENST00000533110 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
CTSB-227ENST00000533110 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
CTSB-227ENST00000533110 SERPINB2P05120 415 aa12.78□□□□□ -0.36
CTSB-227ENST00000533110 HSPA8P11142 646 aaKnown RBP12.78□□□□□ -0.36
CTSB-227ENST00000533110 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
CTSB-227ENST00000533110 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
CTSB-227ENST00000533110 DLEC1Q9Y238 1755 aa12.77□□□□□ -0.36
CTSB-227ENST00000533110 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
CTSB-227ENST00000533110 MTHFSP49914 203 aa12.77□□□□□ -0.37
CTSB-227ENST00000533110 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
CTSB-227ENST00000533110 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
CTSB-227ENST00000533110 TAOK3Q9H2K8 898 aa12.77□□□□□ -0.37
CTSB-227ENST00000533110 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
CTSB-227ENST00000533110 C21orf2O43822 256 aa12.76□□□□□ -0.37
CTSB-227ENST00000533110 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
CTSB-227ENST00000533110 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
CTSB-227ENST00000533110 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
CTSB-227ENST00000533110 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTSB-227ENST00000533110 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
CTSB-227ENST00000533110 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
CTSB-227ENST00000533110 COL15A1P39059 1388 aa12.76□□□□□ -0.37
CTSB-227ENST00000533110 TJP1Q07157 1748 aa12.75□□□□□ -0.37
CTSB-227ENST00000533110 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
CTSB-227ENST00000533110 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
CTSB-227ENST00000533110 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
CTSB-227ENST00000533110 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
CTSB-227ENST00000533110 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
CTSB-227ENST00000533110 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 DEFB115Q30KQ5 88 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 BEGAINQ9BUH8 593 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 TAF1DQ9H5J8 278 aaPredicted RBP12.74□□□□□ -0.37
CTSB-227ENST00000533110 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
CTSB-227ENST00000533110 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
CTSB-227ENST00000533110 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
CTSB-227ENST00000533110 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
CTSB-227ENST00000533110 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
CTSB-227ENST00000533110 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
CTSB-227ENST00000533110 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
CTSB-227ENST00000533110 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
CTSB-227ENST00000533110 NPHP1O15259 732 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 PDE6BP35913 854 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 RGS19P49795 217 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
CTSB-227ENST00000533110 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
CTSB-227ENST00000533110 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
CTSB-227ENST00000533110 TNNT2P45379 298 aaPredicted RBP12.71□□□□□ -0.37
CTSB-227ENST00000533110 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
CTSB-227ENST00000533110 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
CTSB-227ENST00000533110 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
CTSB-227ENST00000533110 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
CTSB-227ENST00000533110 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
CTSB-227ENST00000533110 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
CTSB-227ENST00000533110 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
CTSB-227ENST00000533110 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
CTSB-227ENST00000533110 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
CTSB-227ENST00000533110 EPHX2P34913 555 aa12.68□□□□□ -0.38
CTSB-227ENST00000533110 ECE1P42892 770 aa12.68□□□□□ -0.38
CTSB-227ENST00000533110 GRM1Q13255 1194 aa12.68□□□□□ -0.38
CTSB-227ENST00000533110 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
CTSB-227ENST00000533110 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
CTSB-227ENST00000533110 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
CTSB-227ENST00000533110 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
CTSB-227ENST00000533110 SCN4AP35499 1836 aa12.67□□□□□ -0.38
CTSB-227ENST00000533110 A0A087WZG4 1122 aa12.67□□□□□ -0.38
CTSB-227ENST00000533110 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
CTSB-227ENST00000533110 MAP1SQ66K74 1059 aaPredicted RBP12.67□□□□□ -0.38
CTSB-227ENST00000533110 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
CTSB-227ENST00000533110 ST5P78524 1137 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 STYK1Q6J9G0 422 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
CTSB-227ENST00000533110 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
CTSB-227ENST00000533110 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
CTSB-227ENST00000533110 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
CTSB-227ENST00000533110 STARD3NLO95772 234 aa12.65□□□□□ -0.38
CTSB-227ENST00000533110 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
CTSB-227ENST00000533110 NPM2Q86SE8 214 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 558.8 ms