RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
SSH3-210ENST00000532881 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
SSH3-210ENST00000532881 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
SSH3-210ENST00000532881 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
SSH3-210ENST00000532881 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
SSH3-210ENST00000532881 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
SSH3-210ENST00000532881 ESPNB1AK53 854 aa18.15■□□□□ 0.5
SSH3-210ENST00000532881 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
SSH3-210ENST00000532881 TRIM44Q96DX7 344 aaPredicted RBP18.15■□□□□ 0.5
SSH3-210ENST00000532881 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
SSH3-210ENST00000532881 SPG7Q9UQ90 795 aa18.15■□□□□ 0.5
SSH3-210ENST00000532881 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
SSH3-210ENST00000532881 IP6K1Q92551 441 aa18.15■□□□□ 0.5
SSH3-210ENST00000532881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.15■□□□□ 0.5
SSH3-210ENST00000532881 TMEM63CQ9P1W3 806 aa18.14■□□□□ 0.49
SSH3-210ENST00000532881 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
SSH3-210ENST00000532881 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
SSH3-210ENST00000532881 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
SSH3-210ENST00000532881 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
SSH3-210ENST00000532881 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
SSH3-210ENST00000532881 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
SSH3-210ENST00000532881 TEFQ10587 303 aa18.13■□□□□ 0.49
SSH3-210ENST00000532881 CLCN1P35523 988 aa18.13■□□□□ 0.49
SSH3-210ENST00000532881 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
SSH3-210ENST00000532881 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
SSH3-210ENST00000532881 SYCE3A1L190 88 aa18.12■□□□□ 0.49
SSH3-210ENST00000532881 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
SSH3-210ENST00000532881 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
SSH3-210ENST00000532881 AXIN2Q9Y2T1 843 aa18.12■□□□□ 0.49
SSH3-210ENST00000532881 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
SSH3-210ENST00000532881 OS9Q13438 667 aaPredicted RBP18.11■□□□□ 0.49
SSH3-210ENST00000532881 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SSH3-210ENST00000532881 POLA2Q14181 598 aa18.11■□□□□ 0.49
SSH3-210ENST00000532881 ADCY9O60503 1353 aa18.1■□□□□ 0.49
SSH3-210ENST00000532881 RNF214Q8ND24 703 aa18.1■□□□□ 0.49
SSH3-210ENST00000532881 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
SSH3-210ENST00000532881 LTN1O94822 1766 aa18.1■□□□□ 0.49
SSH3-210ENST00000532881 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
SSH3-210ENST00000532881 MCCP23508 829 aa18.09■□□□□ 0.49
SSH3-210ENST00000532881 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
SSH3-210ENST00000532881 COL9A3Q14050 684 aaPredicted RBP18.09■□□□□ 0.49
SSH3-210ENST00000532881 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
SSH3-210ENST00000532881 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
SSH3-210ENST00000532881 PTMSP20962 102 aa18.09■□□□□ 0.49
SSH3-210ENST00000532881 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
SSH3-210ENST00000532881 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
SSH3-210ENST00000532881 PXDNQ92626 1479 aa18.09■□□□□ 0.49
SSH3-210ENST00000532881 SLC39A6Q13433 755 aa18.08■□□□□ 0.49
SSH3-210ENST00000532881 ANKARQ7Z5J8 1434 aa18.08■□□□□ 0.48
SSH3-210ENST00000532881 GCP02774 474 aa18.08■□□□□ 0.48
SSH3-210ENST00000532881 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
SSH3-210ENST00000532881 BRD1O95696 1058 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 PRKCSHP14314 528 aaPredicted RBP18.07■□□□□ 0.48
SSH3-210ENST00000532881 HSPA4P34932 840 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 ZNF445P59923 1031 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 CUL4AQ13619 759 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
SSH3-210ENST00000532881 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
SSH3-210ENST00000532881 SNX14Q9Y5W7 946 aa18.07■□□□□ 0.48
SSH3-210ENST00000532881 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
SSH3-210ENST00000532881 PTH1RQ03431 593 aa18.06■□□□□ 0.48
SSH3-210ENST00000532881 SGSM2O43147 1006 aa18.06■□□□□ 0.48
SSH3-210ENST00000532881 RNMTO43148 476 aaKnown RBP18.06■□□□□ 0.48
SSH3-210ENST00000532881 SIL1Q9H173 461 aa18.06■□□□□ 0.48
SSH3-210ENST00000532881 LARGE1O95461 756 aa18.05■□□□□ 0.48
SSH3-210ENST00000532881 ANKRD24Q8TF21 1146 aa18.05■□□□□ 0.48
SSH3-210ENST00000532881 ADCK5Q3MIX3 580 aa18.05■□□□□ 0.48
SSH3-210ENST00000532881 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
SSH3-210ENST00000532881 MPNDQ8N594 471 aa18.05■□□□□ 0.48
SSH3-210ENST00000532881 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
SSH3-210ENST00000532881 AK2P54819 239 aa18.04■□□□□ 0.48
SSH3-210ENST00000532881 ANKLE2Q86XL3 938 aa18.04■□□□□ 0.48
SSH3-210ENST00000532881 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
SSH3-210ENST00000532881 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
SSH3-210ENST00000532881 MYL6BP14649 208 aa18.04■□□□□ 0.48
SSH3-210ENST00000532881 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
SSH3-210ENST00000532881 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
SSH3-210ENST00000532881 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
SSH3-210ENST00000532881 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
SSH3-210ENST00000532881 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
SSH3-210ENST00000532881 NFAT5O94916 1531 aa18.03■□□□□ 0.48
SSH3-210ENST00000532881 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
SSH3-210ENST00000532881 ANAPC15P60006 121 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 RUFY3Q7L099 469 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 CNTROBQ8N137 903 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 PPP1R9BQ96SB3 815 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
SSH3-210ENST00000532881 RAD50Q92878 1312 aa18.02■□□□□ 0.48
SSH3-210ENST00000532881 SUCLG2Q96I99 432 aa18.02■□□□□ 0.47
SSH3-210ENST00000532881 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
SSH3-210ENST00000532881 USP48Q86UV5 1035 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 ARHGEF25Q86VW2 580 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
SSH3-210ENST00000532881 AACSQ86V21 672 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 NDUFB9Q9Y6M9 179 aa18.01■□□□□ 0.47
SSH3-210ENST00000532881 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms