RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
AP003040.1-201ENST00000532044 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
AP003040.1-201ENST00000532044 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
AP003040.1-201ENST00000532044 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
AP003040.1-201ENST00000532044 KIF3CO14782 793 aa17.18■□□□□ 0.34
AP003040.1-201ENST00000532044 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
AP003040.1-201ENST00000532044 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
AP003040.1-201ENST00000532044 BCS1LQ9Y276 419 aa17.18■□□□□ 0.34
AP003040.1-201ENST00000532044 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
AP003040.1-201ENST00000532044 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
AP003040.1-201ENST00000532044 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
AP003040.1-201ENST00000532044 NFIXQ14938 502 aa17.17■□□□□ 0.34
AP003040.1-201ENST00000532044 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
AP003040.1-201ENST00000532044 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
AP003040.1-201ENST00000532044 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
AP003040.1-201ENST00000532044 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
AP003040.1-201ENST00000532044 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
AP003040.1-201ENST00000532044 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
AP003040.1-201ENST00000532044 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 ZPR1O75312 459 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 FCHSD2O94868 740 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 CHRNA5P30532 468 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 PRKAR2BP31323 418 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 SBF1O95248 1867 aa17.14■□□□□ 0.33
AP003040.1-201ENST00000532044 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
AP003040.1-201ENST00000532044 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
AP003040.1-201ENST00000532044 KCNQ3O43525 872 aa17.11■□□□□ 0.33
AP003040.1-201ENST00000532044 STARD3NLO95772 234 aa17.11■□□□□ 0.33
AP003040.1-201ENST00000532044 TEFQ10587 303 aa17.11■□□□□ 0.33
AP003040.1-201ENST00000532044 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
AP003040.1-201ENST00000532044 ARHGAP27Q6ZUM4 889 aa17.11■□□□□ 0.33
AP003040.1-201ENST00000532044 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
AP003040.1-201ENST00000532044 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
AP003040.1-201ENST00000532044 SERPINB2P05120 415 aa17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 HSPA6P17066 643 aa17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 IL6STP40189 918 aaPredicted RBP17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
AP003040.1-201ENST00000532044 A0A087WZG4 1122 aa17.08■□□□□ 0.32
AP003040.1-201ENST00000532044 PRELPP51888 382 aa17.08■□□□□ 0.32
AP003040.1-201ENST00000532044 FMNL2Q96PY5 1086 aa17.08■□□□□ 0.32
AP003040.1-201ENST00000532044 CAMTA2O94983 1202 aa17.07■□□□□ 0.32
AP003040.1-201ENST00000532044 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
AP003040.1-201ENST00000532044 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
AP003040.1-201ENST00000532044 A1BGP04217 495 aa17.06■□□□□ 0.32
AP003040.1-201ENST00000532044 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
AP003040.1-201ENST00000532044 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
AP003040.1-201ENST00000532044 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
AP003040.1-201ENST00000532044 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 MCM10Q7L590 875 aa17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 DLG5Q8TDM6 1919 aa17.05■□□□□ 0.32
AP003040.1-201ENST00000532044 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 PRR5LQ6MZQ0 368 aa17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
AP003040.1-201ENST00000532044 ZC3H4Q9UPT8 1303 aaKnown RBP17.03■□□□□ 0.32
AP003040.1-201ENST00000532044 TOMM70O94826 608 aa17.03■□□□□ 0.32
AP003040.1-201ENST00000532044 RASSF7Q02833 373 aa17.03■□□□□ 0.32
AP003040.1-201ENST00000532044 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
AP003040.1-201ENST00000532044 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
AP003040.1-201ENST00000532044 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 NFKBIEO00221 500 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 TTLL6Q8N841 843 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
AP003040.1-201ENST00000532044 BICDL1Q6ZP65 573 aa17.01■□□□□ 0.31
AP003040.1-201ENST00000532044 RGL2O15211 777 aa17■□□□□ 0.31
AP003040.1-201ENST00000532044 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
AP003040.1-201ENST00000532044 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
AP003040.1-201ENST00000532044 H0YIN7 160 aa16.99■□□□□ 0.31
AP003040.1-201ENST00000532044 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
AP003040.1-201ENST00000532044 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
AP003040.1-201ENST00000532044 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
AP003040.1-201ENST00000532044 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
AP003040.1-201ENST00000532044 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 PCNTO95613 3336 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 LMNB1P20700 586 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
AP003040.1-201ENST00000532044 PDE6BP35913 854 aa16.97■□□□□ 0.31
AP003040.1-201ENST00000532044 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
AP003040.1-201ENST00000532044 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
AP003040.1-201ENST00000532044 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
AP003040.1-201ENST00000532044 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
AP003040.1-201ENST00000532044 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms