RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
CCDC90B-217ENST00000530253 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
CCDC90B-217ENST00000530253 NEO1Q92859 1461 aa13.62□□□□□ -0.23
CCDC90B-217ENST00000530253 H7C1W4 665 aa13.62□□□□□ -0.23
CCDC90B-217ENST00000530253 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-217ENST00000530253 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-217ENST00000530253 APBB1O00213 710 aa13.61□□□□□ -0.23
CCDC90B-217ENST00000530253 SOCS7O14512 581 aa13.61□□□□□ -0.23
CCDC90B-217ENST00000530253 DYRK1BQ9Y463 629 aa13.61□□□□□ -0.23
CCDC90B-217ENST00000530253 DNMT3AQ9Y6K1 912 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-217ENST00000530253 FANCAO15360 1455 aa13.61□□□□□ -0.23
CCDC90B-217ENST00000530253 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 A0A1W2PRU2 124 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 RHOQP17081 205 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 NR1H3Q13133 447 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 ZNF837Q96EG3 531 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 CFAP74Q9C0B2 1584 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 CUEDC1Q9NWM3 386 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-217ENST00000530253 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
CCDC90B-217ENST00000530253 CCNB3Q8WWL7 1395 aa13.59□□□□□ -0.23
CCDC90B-217ENST00000530253 IRS1P35568 1242 aa13.59□□□□□ -0.23
CCDC90B-217ENST00000530253 GAS6Q14393 721 aa13.59□□□□□ -0.23
CCDC90B-217ENST00000530253 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
CCDC90B-217ENST00000530253 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.23
CCDC90B-217ENST00000530253 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.23
CCDC90B-217ENST00000530253 FOXK2Q01167 660 aa13.58□□□□□ -0.24
CCDC90B-217ENST00000530253 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
CCDC90B-217ENST00000530253 ABCC1P33527 1531 aa13.58□□□□□ -0.24
CCDC90B-217ENST00000530253 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 IGHA1P01876 353 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
CCDC90B-217ENST00000530253 CLN3Q13286 438 aa13.56□□□□□ -0.24
CCDC90B-217ENST00000530253 SUZ12Q15022 739 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-217ENST00000530253 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
CCDC90B-217ENST00000530253 LYPD4Q6UWN0 246 aa13.56□□□□□ -0.24
CCDC90B-217ENST00000530253 CELA2BP08218 269 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-217ENST00000530253 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
CCDC90B-217ENST00000530253 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
CCDC90B-217ENST00000530253 ARHGEF12Q9NZN5 1544 aa13.54□□□□□ -0.24
CCDC90B-217ENST00000530253 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
CCDC90B-217ENST00000530253 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
CCDC90B-217ENST00000530253 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-217ENST00000530253 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
CCDC90B-217ENST00000530253 LOC100996750A0A140TA64 210 aa13.53□□□□□ -0.24
CCDC90B-217ENST00000530253 KRTAP4-6Q9BYQ5 205 aa13.53□□□□□ -0.24
CCDC90B-217ENST00000530253 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
CCDC90B-217ENST00000530253 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
CCDC90B-217ENST00000530253 SPATA31C2B4DYI2 1134 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 GAS2L1Q99501 681 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 GRIP2Q9C0E4 1043 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.25
CCDC90B-217ENST00000530253 DENND4BO75064 1496 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 POU4F2Q12837 409 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 DBN1Q16643 649 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 NBPF15Q8N660 670 aa13.51□□□□□ -0.25
CCDC90B-217ENST00000530253 KDM5CP41229 1560 aa13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 PLEKHH2Q8IVE3 1493 aa13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 TAS1R3Q7RTX0 852 aa13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-217ENST00000530253 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 TRAK2O60296 914 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 GTPBP3Q969Y2 492 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 ARHGEF10LQ9HCE6 1279 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
CCDC90B-217ENST00000530253 GPR25O00155 361 aa13.48□□□□□ -0.25
CCDC90B-217ENST00000530253 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-217ENST00000530253 GNRH1P01148 92 aa13.48□□□□□ -0.25
CCDC90B-217ENST00000530253 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
CCDC90B-217ENST00000530253 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
CCDC90B-217ENST00000530253 ARHGEF5Q12774 1597 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 BCRP11274 1271 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 SCTRP47872 440 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 ZNF518AQ6AHZ1 1483 aa13.47□□□□□ -0.25
CCDC90B-217ENST00000530253 F11P03951 625 aa13.46□□□□□ -0.25
CCDC90B-217ENST00000530253 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-217ENST00000530253 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
CCDC90B-217ENST00000530253 MX2P20592 715 aa13.45□□□□□ -0.26
CCDC90B-217ENST00000530253 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms