RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
AMBRA1-207ENST00000529553 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
AMBRA1-207ENST00000529553 MTHFSP49914 203 aa16.12■□□□□ 0.17
AMBRA1-207ENST00000529553 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
AMBRA1-207ENST00000529553 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
AMBRA1-207ENST00000529553 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
AMBRA1-207ENST00000529553 SERPINB2P05120 415 aa16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 NFIXQ14938 502 aa16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 ERFEQ4G0M1 354 aa16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 C2CD5Q86YS7 1000 aa16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 WBP1LQ9NX94 342 aa16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
AMBRA1-207ENST00000529553 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
AMBRA1-207ENST00000529553 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
AMBRA1-207ENST00000529553 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
AMBRA1-207ENST00000529553 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
AMBRA1-207ENST00000529553 VEGFBP49765 207 aa16.08■□□□□ 0.16
AMBRA1-207ENST00000529553 ABHD8Q96I13 439 aa16.08■□□□□ 0.16
AMBRA1-207ENST00000529553 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
AMBRA1-207ENST00000529553 IQCA1LA6NCM1 817 aa16.07■□□□□ 0.16
AMBRA1-207ENST00000529553 TMEM88BA6NKF7 163 aa16.07■□□□□ 0.16
AMBRA1-207ENST00000529553 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
AMBRA1-207ENST00000529553 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
AMBRA1-207ENST00000529553 ANKRD26Q9UPS8 1709 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 RGS19P49795 217 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 LBX1P52954 281 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 BRIP1Q9BX63 1249 aa16.06■□□□□ 0.16
AMBRA1-207ENST00000529553 DDNO94850 711 aaPredicted RBP16.05■□□□□ 0.16
AMBRA1-207ENST00000529553 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
AMBRA1-207ENST00000529553 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
AMBRA1-207ENST00000529553 PDE6BP35913 854 aa16.05■□□□□ 0.16
AMBRA1-207ENST00000529553 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
AMBRA1-207ENST00000529553 C21orf2O43822 256 aa16.04■□□□□ 0.16
AMBRA1-207ENST00000529553 ITGBL1O95965 494 aaPredicted RBP16.04■□□□□ 0.16
AMBRA1-207ENST00000529553 MAP2K1Q02750 393 aaPredicted RBP16.04■□□□□ 0.16
AMBRA1-207ENST00000529553 MLLT1Q03111 559 aaPredicted RBP16.04■□□□□ 0.16
AMBRA1-207ENST00000529553 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
AMBRA1-207ENST00000529553 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
AMBRA1-207ENST00000529553 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
AMBRA1-207ENST00000529553 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
AMBRA1-207ENST00000529553 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
AMBRA1-207ENST00000529553 COL15A1P39059 1388 aa16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 HSPA8P11142 646 aaKnown RBP16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 DEFB115Q30KQ5 88 aa16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.16
AMBRA1-207ENST00000529553 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
AMBRA1-207ENST00000529553 A0A087WZG4 1122 aa16.01■□□□□ 0.15
AMBRA1-207ENST00000529553 CNKSR1Q969H4 720 aa16.01■□□□□ 0.15
AMBRA1-207ENST00000529553 SLC52A2Q9HAB3 445 aa16.01■□□□□ 0.15
AMBRA1-207ENST00000529553 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
AMBRA1-207ENST00000529553 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
AMBRA1-207ENST00000529553 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
AMBRA1-207ENST00000529553 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
AMBRA1-207ENST00000529553 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
AMBRA1-207ENST00000529553 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 TJP1Q07157 1748 aa15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 STYK1Q6J9G0 422 aa15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 PNMA8AQ86V59 439 aaPredicted RBP15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 CARMIL3Q8ND23 1372 aa15.98■□□□□ 0.15
AMBRA1-207ENST00000529553 WDR33Q9C0J8 1336 aaKnown RBP15.97■□□□□ 0.15
AMBRA1-207ENST00000529553 STARD3NLO95772 234 aa15.97■□□□□ 0.15
AMBRA1-207ENST00000529553 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
AMBRA1-207ENST00000529553 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
AMBRA1-207ENST00000529553 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 SULT6B1Q6IMI4 303 aa15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 HACL1Q9UJ83 578 aa15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
AMBRA1-207ENST00000529553 SRGNP10124 158 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 SLC39A6Q13433 755 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 EAPPQ56P03 285 aaPredicted RBP15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 TBC1D9BQ66K14 1250 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 CNTROBQ8N137 903 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 CCDC88AQ3V6T2 1871 aa15.95■□□□□ 0.14
AMBRA1-207ENST00000529553 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 EPHX2P34913 555 aa15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 BEGAINQ9BUH8 593 aa15.94■□□□□ 0.14
AMBRA1-207ENST00000529553 SETDB2Q96T68 719 aa15.93■□□□□ 0.14
AMBRA1-207ENST00000529553 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
AMBRA1-207ENST00000529553 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
AMBRA1-207ENST00000529553 ECE1P42892 770 aa15.92■□□□□ 0.14
AMBRA1-207ENST00000529553 ABT1Q9ULW3 272 aaKnown RBP15.92■□□□□ 0.14
AMBRA1-207ENST00000529553 SCN4AP35499 1836 aa15.91■□□□□ 0.14
AMBRA1-207ENST00000529553 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
AMBRA1-207ENST00000529553 ST5P78524 1137 aa15.91■□□□□ 0.14
AMBRA1-207ENST00000529553 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
AMBRA1-207ENST00000529553 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms