RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
COPB1-206ENST00000529210 PNNQ9H307 717 aaKnown RBP16.04■□□□□ 0.16
COPB1-206ENST00000529210 NARFQ9UHQ1 456 aa16.04■□□□□ 0.16
COPB1-206ENST00000529210 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
COPB1-206ENST00000529210 TM4SF1P30408 202 aa16.03■□□□□ 0.16
COPB1-206ENST00000529210 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
COPB1-206ENST00000529210 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
COPB1-206ENST00000529210 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
COPB1-206ENST00000529210 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
COPB1-206ENST00000529210 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
COPB1-206ENST00000529210 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
COPB1-206ENST00000529210 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
COPB1-206ENST00000529210 FKBP8Q14318 412 aa16.02■□□□□ 0.16
COPB1-206ENST00000529210 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
COPB1-206ENST00000529210 ZPR1O75312 459 aa16.01■□□□□ 0.15
COPB1-206ENST00000529210 NEFMP07197 916 aa16.01■□□□□ 0.15
COPB1-206ENST00000529210 MCM10Q7L590 875 aa16.01■□□□□ 0.15
COPB1-206ENST00000529210 SCN7AQ01118 1682 aa16■□□□□ 0.15
COPB1-206ENST00000529210 A0A087WZG4 1122 aa16■□□□□ 0.15
COPB1-206ENST00000529210 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
COPB1-206ENST00000529210 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
COPB1-206ENST00000529210 NFE2L2Q16236 605 aa16■□□□□ 0.15
COPB1-206ENST00000529210 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
COPB1-206ENST00000529210 ZNF784Q8NCA9 323 aaPredicted RBP16■□□□□ 0.15
COPB1-206ENST00000529210 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
COPB1-206ENST00000529210 KCNQ3O43525 872 aa15.99■□□□□ 0.15
COPB1-206ENST00000529210 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
COPB1-206ENST00000529210 DDR1Q08345 913 aa15.99■□□□□ 0.15
COPB1-206ENST00000529210 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
COPB1-206ENST00000529210 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
COPB1-206ENST00000529210 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
COPB1-206ENST00000529210 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
COPB1-206ENST00000529210 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
COPB1-206ENST00000529210 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
COPB1-206ENST00000529210 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
COPB1-206ENST00000529210 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
COPB1-206ENST00000529210 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
COPB1-206ENST00000529210 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
COPB1-206ENST00000529210 LAMB4A4D0S4 1761 aa15.96■□□□□ 0.15
COPB1-206ENST00000529210 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
COPB1-206ENST00000529210 KCNA3P22001 575 aa15.96■□□□□ 0.15
COPB1-206ENST00000529210 NFIXQ14938 502 aa15.96■□□□□ 0.15
COPB1-206ENST00000529210 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
COPB1-206ENST00000529210 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
COPB1-206ENST00000529210 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
COPB1-206ENST00000529210 RGL2O15211 777 aa15.95■□□□□ 0.14
COPB1-206ENST00000529210 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
COPB1-206ENST00000529210 ADCY9O60503 1353 aa15.95■□□□□ 0.14
COPB1-206ENST00000529210 A1BGP04217 495 aa15.94■□□□□ 0.14
COPB1-206ENST00000529210 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
COPB1-206ENST00000529210 DPEP1P16444 411 aa15.93■□□□□ 0.14
COPB1-206ENST00000529210 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
COPB1-206ENST00000529210 DLEC1Q9Y238 1755 aa15.92■□□□□ 0.14
COPB1-206ENST00000529210 PRAMEF22A3QJZ6 481 aa15.92■□□□□ 0.14
COPB1-206ENST00000529210 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
COPB1-206ENST00000529210 SERPINB2P05120 415 aa15.91■□□□□ 0.14
COPB1-206ENST00000529210 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
COPB1-206ENST00000529210 CLEC4GQ6UXB4 293 aa15.91■□□□□ 0.14
COPB1-206ENST00000529210 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
COPB1-206ENST00000529210 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
COPB1-206ENST00000529210 EIF4A1P60842 406 aaKnown RBP15.9■□□□□ 0.14
COPB1-206ENST00000529210 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
COPB1-206ENST00000529210 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
COPB1-206ENST00000529210 PIM2Q9P1W9 311 aa15.9■□□□□ 0.14
COPB1-206ENST00000529210 TBC1D2BQ9UPU7 963 aa15.9■□□□□ 0.14
COPB1-206ENST00000529210 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 RIPK4P57078 832 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 TBC1D9BQ66K14 1250 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
COPB1-206ENST00000529210 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
COPB1-206ENST00000529210 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
COPB1-206ENST00000529210 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
COPB1-206ENST00000529210 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
COPB1-206ENST00000529210 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
COPB1-206ENST00000529210 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
COPB1-206ENST00000529210 WDR43Q15061 677 aaKnown RBP eCLIP15.87■□□□□ 0.13
COPB1-206ENST00000529210 ERBB4Q15303 1308 aa15.87■□□□□ 0.13
COPB1-206ENST00000529210 ATP10DQ9P241 1426 aa15.86■□□□□ 0.13
COPB1-206ENST00000529210 CHRNA5P30532 468 aa15.86■□□□□ 0.13
COPB1-206ENST00000529210 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
COPB1-206ENST00000529210 WWC3Q9ULE0 1092 aa15.86■□□□□ 0.13
COPB1-206ENST00000529210 ADAMTS8Q9UP79 889 aa15.86■□□□□ 0.13
COPB1-206ENST00000529210 ZNF330Q9Y3S2 320 aaPredicted RBP15.86■□□□□ 0.13
COPB1-206ENST00000529210 PRR5LQ6MZQ0 368 aa15.85■□□□□ 0.13
COPB1-206ENST00000529210 SETDB2Q96T68 719 aa15.85■□□□□ 0.13
COPB1-206ENST00000529210 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
COPB1-206ENST00000529210 ZNF652Q9Y2D9 606 aa15.85■□□□□ 0.13
COPB1-206ENST00000529210 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
COPB1-206ENST00000529210 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
COPB1-206ENST00000529210 TSPYL4Q9UJ04 414 aa15.84■□□□□ 0.13
COPB1-206ENST00000529210 TRIM35Q9UPQ4 493 aa15.84■□□□□ 0.13
COPB1-206ENST00000529210 PDE6BP35913 854 aa15.83■□□□□ 0.12
COPB1-206ENST00000529210 BICDL1Q6ZP65 573 aa15.83■□□□□ 0.12
COPB1-206ENST00000529210 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
COPB1-206ENST00000529210 SBF1O95248 1867 aa15.82■□□□□ 0.12
COPB1-206ENST00000529210 H0YIN7 160 aa15.82■□□□□ 0.12
COPB1-206ENST00000529210 CHL1O00533 1208 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms