RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
USF1-208ENST00000528768 CHMP4BQ9H444 224 aaKnown RBP14.96□□□□□ -0.01
USF1-208ENST00000528768 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
USF1-208ENST00000528768 GNAI1P63096 354 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 SMC4Q9NTJ3 1288 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 EMILIN1Q9Y6C2 1016 aa14.95□□□□□ -0.02
USF1-208ENST00000528768 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 C10orf71Q711Q0 1435 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 PHF14O94880 888 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
USF1-208ENST00000528768 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 COG6Q9Y2V7 657 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 PXDNLA1KZ92 1463 aa14.94□□□□□ -0.02
USF1-208ENST00000528768 ARHGAP27Q6ZUM4 889 aa14.93□□□□□ -0.02
USF1-208ENST00000528768 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
USF1-208ENST00000528768 BACH2Q9BYV9 841 aa14.93□□□□□ -0.02
USF1-208ENST00000528768 RWDD1Q9H446 243 aaPredicted RBP14.93□□□□□ -0.02
USF1-208ENST00000528768 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 PANK1Q8TE04 598 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
USF1-208ENST00000528768 MMP10P09238 476 aa14.91□□□□□ -0.02
USF1-208ENST00000528768 HMOX1P09601 288 aa14.91□□□□□ -0.02
USF1-208ENST00000528768 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
USF1-208ENST00000528768 NLGN1Q8N2Q7 840 aa14.91□□□□□ -0.02
USF1-208ENST00000528768 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
USF1-208ENST00000528768 LOC102724428A0A0B4J2F2 783 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 SIK1P57059 783 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 RRS1Q15050 365 aaKnown RBP14.9□□□□□ -0.02
USF1-208ENST00000528768 AMIGO3Q86WK7 504 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 SMC1BQ8NDV3 1235 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 IPO9Q96P70 1041 aaKnown RBP14.9□□□□□ -0.02
USF1-208ENST00000528768 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 DDX19BQ9UMR2 479 aa14.9□□□□□ -0.02
USF1-208ENST00000528768 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
USF1-208ENST00000528768 GNPATO15228 680 aa14.89□□□□□ -0.03
USF1-208ENST00000528768 FAM161AQ3B820 660 aa14.89□□□□□ -0.03
USF1-208ENST00000528768 C9orf131Q5VYM1 1079 aa14.89□□□□□ -0.03
USF1-208ENST00000528768 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
USF1-208ENST00000528768 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
USF1-208ENST00000528768 KIF24Q5T7B8 1368 aa14.88□□□□□ -0.03
USF1-208ENST00000528768 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
USF1-208ENST00000528768 BRPF1P55201 1214 aaPredicted RBP14.88□□□□□ -0.03
USF1-208ENST00000528768 NKX1-1Q15270 411 aaPredicted RBP14.88□□□□□ -0.03
USF1-208ENST00000528768 ATF7IPQ6VMQ6 1270 aa14.88□□□□□ -0.03
USF1-208ENST00000528768 BCL2L13Q9BXK5 485 aa14.88□□□□□ -0.03
USF1-208ENST00000528768 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
USF1-208ENST00000528768 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
USF1-208ENST00000528768 CYP27B1O15528 508 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 ADRA2BP18089 450 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 FBLN1P23142 703 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 SSH1Q8WYL5 1049 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 PIGBQ92521 554 aa14.87□□□□□ -0.03
USF1-208ENST00000528768 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
USF1-208ENST00000528768 KIAA1551Q9HCM1 1747 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 HTRA3P83110 453 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
USF1-208ENST00000528768 TRAPPC3LQ5T215 181 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 USHBP1Q8N6Y0 703 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 PHACTR3Q96KR7 559 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 ITGB4P16144 1822 aa14.86□□□□□ -0.03
USF1-208ENST00000528768 TNRC6CQ9HCJ0 1690 aaKnown RBP14.86□□□□□ -0.03
USF1-208ENST00000528768 PCNTO95613 3336 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 DPEP1P16444 411 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 ARHGAP45Q92619 1136 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 TMOD3Q9NYL9 352 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 PIM2Q9P1W9 311 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 RTCBQ9Y3I0 505 aaKnown RBP14.85□□□□□ -0.03
USF1-208ENST00000528768 PARP3Q9Y6F1 533 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 N4BP2Q86UW6 1770 aaPredicted RBP14.85□□□□□ -0.03
USF1-208ENST00000528768 FLT4P35916 1363 aa14.85□□□□□ -0.03
USF1-208ENST00000528768 SULT6B1Q6IMI4 303 aa14.84□□□□□ -0.03
USF1-208ENST00000528768 NOB1Q9ULX3 412 aaKnown RBP14.84□□□□□ -0.03
USF1-208ENST00000528768 ARFGEF1Q9Y6D6 1849 aa14.84□□□□□ -0.03
USF1-208ENST00000528768 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 IGHDP01880 384 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 ZNF853P0CG23 659 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
USF1-208ENST00000528768 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
USF1-208ENST00000528768 RGS3P49796 1198 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 DALRD3Q5D0E6 543 aaKnown RBP14.83□□□□□ -0.04
USF1-208ENST00000528768 ITPRIPQ8IWB1 547 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 RRAGCQ9HB90 399 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.83□□□□□ -0.04
USF1-208ENST00000528768 RNF181Q9P0P0 153 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.04
USF1-208ENST00000528768 RLBP1P12271 317 aa14.82□□□□□ -0.04
USF1-208ENST00000528768 TRIM27P14373 513 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms