RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
BDNF-213ENST00000525950 POLA2Q14181 598 aa9.63□□□□□ -0.87
BDNF-213ENST00000525950 TXNDC2Q86VQ3 553 aa9.63□□□□□ -0.87
BDNF-213ENST00000525950 TRIM6-TRIM34B2RNG4 842 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
BDNF-213ENST00000525950 RILPL2Q969X0 211 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 IGSF1Q8N6C5 1336 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
BDNF-213ENST00000525950 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
BDNF-213ENST00000525950 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
BDNF-213ENST00000525950 KCNB2Q92953 911 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 LIMCH1Q9UPQ0 1083 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 MAP3K19Q56UN5 1328 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 FLT4P35916 1363 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 ADCY5O95622 1261 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
BDNF-213ENST00000525950 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
BDNF-213ENST00000525950 STX6O43752 255 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 LSG1Q9H089 658 aaKnown RBP9.61□□□□□ -0.87
BDNF-213ENST00000525950 SNX14Q9Y5W7 946 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 ACEP12821 1306 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 F13A1P00488 732 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 UNC5CLQ8IV45 518 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 PI4K2BQ8TCG2 481 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 TCHHQ07283 1943 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
BDNF-213ENST00000525950 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 NCKAP5LQ9HCH0 1330 aa9.61□□□□□ -0.87
BDNF-213ENST00000525950 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
BDNF-213ENST00000525950 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
BDNF-213ENST00000525950 SYT1P21579 422 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 SH2B1Q9NRF2 756 aaPredicted RBP9.6□□□□□ -0.87
BDNF-213ENST00000525950 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 TSHZ3Q63HK5 1081 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 KIF1BPQ96EK5 621 aa9.6□□□□□ -0.87
BDNF-213ENST00000525950 LRRFIP2Q9Y608 721 aaKnown RBP9.6□□□□□ -0.87
BDNF-213ENST00000525950 TTC41PQ6P2S7 1318 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 CCDC171Q6TFL3 1326 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 DIP2AQ14689 1571 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
BDNF-213ENST00000525950 VPS53Q5VIR6 699 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 CNPY2Q9Y2B0 182 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
BDNF-213ENST00000525950 AK2P54819 239 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 IL25Q9H293 177 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 MIS18AQ9NYP9 233 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 SMC3Q9UQE7 1217 aa9.59□□□□□ -0.87
BDNF-213ENST00000525950 RHPN1Q8TCX5 695 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 KIF3AQ9Y496 699 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 USP54Q70EL1 1684 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 GOLGA6L6A8MZA4 724 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 HCLS1P14317 486 aaPredicted RBP9.58□□□□□ -0.88
BDNF-213ENST00000525950 DNTTIP2Q5QJE6 756 aaKnown RBP9.58□□□□□ -0.88
BDNF-213ENST00000525950 ADAMTS13Q76LX8 1427 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 ELP1O95163 1332 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 FOXO3O43524 673 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 HOXB7P09629 217 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 RUFY2Q8WXA3 655 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 HYPKQ9NX55 129 aa9.58□□□□□ -0.88
BDNF-213ENST00000525950 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
BDNF-213ENST00000525950 EYA1Q99502 592 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 MTMR6Q9Y217 621 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 SYCP1Q15431 976 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 TAF7Q15545 349 aaPredicted RBP9.57□□□□□ -0.88
BDNF-213ENST00000525950 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 GLRX3O76003 335 aaKnown RBP9.57□□□□□ -0.88
BDNF-213ENST00000525950 DMTNQ08495 405 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 ALDH8A1Q9H2A2 487 aaPredicted RBP9.57□□□□□ -0.88
BDNF-213ENST00000525950 TTC12Q9H892 705 aaPredicted RBP9.57□□□□□ -0.88
BDNF-213ENST00000525950 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
BDNF-213ENST00000525950 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 MTX1Q13505 466 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
BDNF-213ENST00000525950 PPP1R42Q7Z4L9 355 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 GTPBP4Q9BZE4 634 aaKnown RBP9.56□□□□□ -0.88
BDNF-213ENST00000525950 RIMS1Q86UR5 1692 aaKnown RBP9.56□□□□□ -0.88
BDNF-213ENST00000525950 NWD1Q149M9 1564 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 CTIFO43310 598 aaKnown RBP9.56□□□□□ -0.88
BDNF-213ENST00000525950 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 PLEKHG1Q9ULL1 1385 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 ANKRD7Q92527 254 aa9.56□□□□□ -0.88
BDNF-213ENST00000525950 SURF6O75683 361 aaKnown RBP9.55□□□□□ -0.88
BDNF-213ENST00000525950 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
BDNF-213ENST00000525950 ZNF830Q96NB3 372 aaPredicted RBP9.55□□□□□ -0.88
BDNF-213ENST00000525950 MED1Q15648 1581 aaPredicted RBP9.55□□□□□ -0.88
BDNF-213ENST00000525950 UBR1Q8IWV7 1749 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms