RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 FMNL2Q96PY5 1086 aa21.01■□□□□ 0.95
SREK1-212ENST00000522912 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
SREK1-212ENST00000522912 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
SREK1-212ENST00000522912 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
SREK1-212ENST00000522912 UBTFL1P0CB47 393 aaPredicted RBP21■□□□□ 0.95
SREK1-212ENST00000522912 ATP8B2P98198 1209 aa21■□□□□ 0.95
SREK1-212ENST00000522912 KSR2Q6VAB6 950 aa21■□□□□ 0.95
SREK1-212ENST00000522912 MAP3K2Q9Y2U5 619 aa21■□□□□ 0.95
SREK1-212ENST00000522912 PNMA6EA0A0J9YXQ4 647 aa21■□□□□ 0.95
SREK1-212ENST00000522912 USP16Q9Y5T5 823 aa21■□□□□ 0.95
SREK1-212ENST00000522912 ZBTB47Q9UFB7 747 aaPredicted RBP20.99■□□□□ 0.95
SREK1-212ENST00000522912 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
SREK1-212ENST00000522912 PLEKHM2Q8IWE5 1019 aa20.99■□□□□ 0.95
SREK1-212ENST00000522912 C16orf71Q8IYS4 520 aaPredicted RBP20.99■□□□□ 0.95
SREK1-212ENST00000522912 UBR2Q8IWV8 1755 aa20.99■□□□□ 0.95
SREK1-212ENST00000522912 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
SREK1-212ENST00000522912 SMARCA5O60264 1052 aaPredicted RBP20.98■□□□□ 0.95
SREK1-212ENST00000522912 LAMB4A4D0S4 1761 aa20.98■□□□□ 0.95
SREK1-212ENST00000522912 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
SREK1-212ENST00000522912 APBB1O00213 710 aa20.97■□□□□ 0.95
SREK1-212ENST00000522912 NBPF7P0C2Y1 421 aaPredicted RBP20.97■□□□□ 0.95
SREK1-212ENST00000522912 AIMP1Q12904 312 aaKnown RBP20.97■□□□□ 0.95
SREK1-212ENST00000522912 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
SREK1-212ENST00000522912 MYL6BP14649 208 aa20.96■□□□□ 0.95
SREK1-212ENST00000522912 LRP10Q7Z4F1 713 aa20.96■□□□□ 0.95
SREK1-212ENST00000522912 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
SREK1-212ENST00000522912 OTUD7AQ8TE49 926 aaPredicted RBP20.95■□□□□ 0.94
SREK1-212ENST00000522912 ALDH1L1O75891 902 aa20.95■□□□□ 0.94
SREK1-212ENST00000522912 DDX58O95786 925 aaKnown RBP20.95■□□□□ 0.94
SREK1-212ENST00000522912 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
SREK1-212ENST00000522912 EXOC6BQ9Y2D4 811 aa20.95■□□□□ 0.94
SREK1-212ENST00000522912 KCPQ6ZWJ8 1503 aa20.95■□□□□ 0.94
SREK1-212ENST00000522912 PLCH1Q4KWH8 1693 aa20.94■□□□□ 0.94
SREK1-212ENST00000522912 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
SREK1-212ENST00000522912 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
SREK1-212ENST00000522912 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
SREK1-212ENST00000522912 SSH3Q8TE77 659 aa20.94■□□□□ 0.94
SREK1-212ENST00000522912 CWF19L2Q2TBE0 894 aaKnown RBP20.93■□□□□ 0.94
SREK1-212ENST00000522912 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
SREK1-212ENST00000522912 PIP4K2BP78356 416 aa20.92■□□□□ 0.94
SREK1-212ENST00000522912 WNK3Q9BYP7 1800 aa20.92■□□□□ 0.94
SREK1-212ENST00000522912 GSPT1P15170 499 aaKnown RBP20.92■□□□□ 0.94
SREK1-212ENST00000522912 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
SREK1-212ENST00000522912 LINS1Q8NG48 757 aa20.92■□□□□ 0.94
SREK1-212ENST00000522912 TBC1D32Q96NH3 1257 aa20.92■□□□□ 0.94
SREK1-212ENST00000522912 TOM1O60784 492 aa20.91■□□□□ 0.94
SREK1-212ENST00000522912 ADAMTS2O95450 1211 aa20.91■□□□□ 0.94
SREK1-212ENST00000522912 POLA2Q14181 598 aa20.91■□□□□ 0.94
SREK1-212ENST00000522912 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
SREK1-212ENST00000522912 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
SREK1-212ENST00000522912 IBTKQ9P2D0 1353 aaPredicted RBP20.91■□□□□ 0.94
SREK1-212ENST00000522912 TNS2Q63HR2 1409 aa20.91■□□□□ 0.94
SREK1-212ENST00000522912 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
SREK1-212ENST00000522912 TTC22Q5TAA0 569 aa20.9■□□□□ 0.94
SREK1-212ENST00000522912 ITGB4P16144 1822 aa20.9■□□□□ 0.94
SREK1-212ENST00000522912 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
SREK1-212ENST00000522912 IGKV5-2P06315 115 aa20.89■□□□□ 0.93
SREK1-212ENST00000522912 MFAP1P55081 439 aaKnown RBP20.89■□□□□ 0.93
SREK1-212ENST00000522912 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
SREK1-212ENST00000522912 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
SREK1-212ENST00000522912 ANKRD13DQ6ZTN6 518 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 TMOD3Q9NYL9 352 aa20.88■□□□□ 0.93
SREK1-212ENST00000522912 UTYO14607 1347 aa20.87■□□□□ 0.93
SREK1-212ENST00000522912 SRGAP3O43295 1099 aa20.87■□□□□ 0.93
SREK1-212ENST00000522912 METTL22Q9BUU2 404 aaPredicted RBP20.87■□□□□ 0.93
SREK1-212ENST00000522912 ARFGEF2Q9Y6D5 1785 aa20.87■□□□□ 0.93
SREK1-212ENST00000522912 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
SREK1-212ENST00000522912 ERBB4Q15303 1308 aa20.86■□□□□ 0.93
SREK1-212ENST00000522912 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
SREK1-212ENST00000522912 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
SREK1-212ENST00000522912 GRM8O00222 908 aa20.86■□□□□ 0.93
SREK1-212ENST00000522912 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
SREK1-212ENST00000522912 NUTM2AQ8IVF1 878 aaPredicted RBP20.86■□□□□ 0.93
SREK1-212ENST00000522912 PIGBQ92521 554 aa20.86■□□□□ 0.93
SREK1-212ENST00000522912 SALL3Q9BXA9 1300 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 NEURL1BA8MQ27 555 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 SLC4A3P48751 1232 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 MTX1Q13505 466 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 MYD88Q99836 296 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
SREK1-212ENST00000522912 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 OSBPL3Q9H4L5 887 aa20.85■□□□□ 0.93
SREK1-212ENST00000522912 EXOC5O00471 708 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 A1BGP04217 495 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 PDE1AP54750 535 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 KAZALD1Q96I82 304 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 ASAP1Q9ULH1 1129 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 SPATA31A1Q5TZJ5 1347 aa20.84■□□□□ 0.93
SREK1-212ENST00000522912 SURF6O75683 361 aaKnown RBP20.83■□□□□ 0.93
SREK1-212ENST00000522912 CDC45O75419 566 aa20.83■□□□□ 0.92
SREK1-212ENST00000522912 LRP6O75581 1613 aa20.83■□□□□ 0.92
SREK1-212ENST00000522912 TUBGCP6Q96RT7 1819 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 UBAP1LF5GYI3 381 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms