RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
SPIDR-216ENST00000521918 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-216ENST00000521918 HIRIP3Q9BW71 556 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-216ENST00000521918 ALS2Q96Q42 1657 aa8.52□□□□□ -1.05
SPIDR-216ENST00000521918 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.05
SPIDR-216ENST00000521918 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 LILRB3O75022 631 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 XPCQ01831 940 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-216ENST00000521918 NBPF8Q3BBV2 869 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 IL21Q9HBE4 155 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 SALL2Q9Y467 1007 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-216ENST00000521918 CRYBG1Q9Y4K1 1723 aa8.51□□□□□ -1.05
SPIDR-216ENST00000521918 SBNO1A3KN83 1393 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 NR1I2O75469 434 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
SPIDR-216ENST00000521918 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
SPIDR-216ENST00000521918 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
SPIDR-216ENST00000521918 MARF1Q9Y4F3 1742 aaKnown RBP8.5□□□□□ -1.05
SPIDR-216ENST00000521918 ROCK2O75116 1388 aaKnown RBP8.49□□□□□ -1.05
SPIDR-216ENST00000521918 ZPR1O75312 459 aa8.49□□□□□ -1.05
SPIDR-216ENST00000521918 KCNC4Q03721 635 aa8.49□□□□□ -1.05
SPIDR-216ENST00000521918 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
SPIDR-216ENST00000521918 CABLES1Q8TDN4 633 aa8.49□□□□□ -1.05
SPIDR-216ENST00000521918 AFF2P51816 1311 aa8.49□□□□□ -1.05
SPIDR-216ENST00000521918 CENPJQ9HC77 1338 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-216ENST00000521918 POLR3AO14802 1390 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 NUTM2BA6NNL0 878 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 NUTM2EB1AL46 878 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 MTMR2Q13614 643 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 Q3C1V9 767 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 MEX3CQ5U5Q3 659 aaKnown RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 KRT28Q7Z3Y7 464 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 NUTM2AQ8IVF1 878 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 CDK12Q9NYV4 1490 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.48□□□□□ -1.05
SPIDR-216ENST00000521918 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
SPIDR-216ENST00000521918 EP400Q96L91 3159 aa8.47□□□□□ -1.05
SPIDR-216ENST00000521918 TLL1O43897 1013 aa8.47□□□□□ -1.05
SPIDR-216ENST00000521918 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-216ENST00000521918 ZNF772Q68DY9 489 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-216ENST00000521918 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-216ENST00000521918 NUDT16Q96DE0 195 aaKnown RBP8.47□□□□□ -1.05
SPIDR-216ENST00000521918 CDK19Q9BWU1 502 aa8.47□□□□□ -1.05
SPIDR-216ENST00000521918 SLIT2O94813 1529 aa8.47□□□□□ -1.05
SPIDR-216ENST00000521918 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
SPIDR-216ENST00000521918 ATRNO75882 1429 aa8.46□□□□□ -1.05
SPIDR-216ENST00000521918 BCL9LQ86UU0 1499 aa8.46□□□□□ -1.05
SPIDR-216ENST00000521918 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
SPIDR-216ENST00000521918 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-216ENST00000521918 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
SPIDR-216ENST00000521918 RGS12O14924 1447 aa8.46□□□□□ -1.06
SPIDR-216ENST00000521918 PHRF1Q9P1Y6 1649 aaKnown RBP8.45□□□□□ -1.06
SPIDR-216ENST00000521918 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 PSME1Q06323 249 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 RETREG3Q86VR2 466 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-216ENST00000521918 SPSB2Q99619 263 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 PLCH1Q4KWH8 1693 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 PPIP5K1Q6PFW1 1433 aa8.45□□□□□ -1.06
SPIDR-216ENST00000521918 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 RFC5P40937 340 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
SPIDR-216ENST00000521918 CLSPNQ9HAW4 1339 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 NRKQ7Z2Y5 1582 aa8.44□□□□□ -1.06
SPIDR-216ENST00000521918 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
SPIDR-216ENST00000521918 ADH1BP00325 375 aa8.43□□□□□ -1.06
SPIDR-216ENST00000521918 ACEP12821 1306 aa8.43□□□□□ -1.06
SPIDR-216ENST00000521918 GLI3P10071 1580 aa8.43□□□□□ -1.06
SPIDR-216ENST00000521918 MSS51Q4VC12 460 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 NGDNQ8NEJ9 315 aaKnown RBP8.42□□□□□ -1.06
SPIDR-216ENST00000521918 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 CARD11Q9BXL7 1154 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 PCGF6Q9BYE7 350 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 USP19O94966 1318 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
SPIDR-216ENST00000521918 USP6P35125 1406 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 AKAP12Q02952 1782 aa8.42□□□□□ -1.06
SPIDR-216ENST00000521918 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
SPIDR-216ENST00000521918 PIK3C2AO00443 1686 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 CD163L1Q9NR16 1453 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 CPSF1Q10570 1443 aaKnown RBP8.41□□□□□ -1.06
SPIDR-216ENST00000521918 EVC2Q86UK5 1308 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 RXRBP28702 533 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 RBM6P78332 1123 aaKnown RBP8.41□□□□□ -1.06
SPIDR-216ENST00000521918 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
SPIDR-216ENST00000521918 QTRT2Q9H974 415 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms