RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 TTC5Q8N0Z6 440 aa22.99■■□□□ 1.27
TRAPPC9-210ENST00000521667 ATP8B2P98198 1209 aa22.99■■□□□ 1.27
TRAPPC9-210ENST00000521667 DDX21Q9NR30 783 aaKnown RBP eCLIP22.99■■□□□ 1.27
TRAPPC9-210ENST00000521667 CERKQ8TCT0 537 aa22.98■■□□□ 1.27
TRAPPC9-210ENST00000521667 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC9-210ENST00000521667 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
TRAPPC9-210ENST00000521667 LRRFIP2Q9Y608 721 aaKnown RBP22.98■■□□□ 1.27
TRAPPC9-210ENST00000521667 PLEKHM2Q8IWE5 1019 aa22.97■■□□□ 1.27
TRAPPC9-210ENST00000521667 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 TBC1D32Q96NH3 1257 aa22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 PDIA6Q15084 440 aa22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
TRAPPC9-210ENST00000521667 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 C5P01031 1676 aa22.95■■□□□ 1.26
TRAPPC9-210ENST00000521667 PNMA6EA0A0J9YXQ4 647 aa22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 APBB1O00213 710 aa22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 NKX1-1Q15270 411 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 DDX58O95786 925 aaKnown RBP22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 C16orf71Q8IYS4 520 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
TRAPPC9-210ENST00000521667 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC9-210ENST00000521667 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
TRAPPC9-210ENST00000521667 ALDH1L1O75891 902 aa22.92■■□□□ 1.26
TRAPPC9-210ENST00000521667 MFAP1P55081 439 aaKnown RBP22.92■■□□□ 1.26
TRAPPC9-210ENST00000521667 NBPF7P0C2Y1 421 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC9-210ENST00000521667 DAXXQ9UER7 740 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC9-210ENST00000521667 EXOC6BQ9Y2D4 811 aa22.91■■□□□ 1.26
TRAPPC9-210ENST00000521667 TTC22Q5TAA0 569 aa22.91■■□□□ 1.26
TRAPPC9-210ENST00000521667 BCL11AQ9H165 835 aa22.91■■□□□ 1.26
TRAPPC9-210ENST00000521667 GSPT1P15170 499 aaKnown RBP22.9■■□□□ 1.26
TRAPPC9-210ENST00000521667 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
TRAPPC9-210ENST00000521667 OTUD7AQ8TE49 926 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC9-210ENST00000521667 SSH3Q8TE77 659 aa22.9■■□□□ 1.26
TRAPPC9-210ENST00000521667 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.26
TRAPPC9-210ENST00000521667 USP16Q9Y5T5 823 aa22.89■■□□□ 1.26
TRAPPC9-210ENST00000521667 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
TRAPPC9-210ENST00000521667 IBTKQ9P2D0 1353 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC9-210ENST00000521667 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
TRAPPC9-210ENST00000521667 MYL6BP14649 208 aa22.88■■□□□ 1.25
TRAPPC9-210ENST00000521667 LINS1Q8NG48 757 aa22.88■■□□□ 1.25
TRAPPC9-210ENST00000521667 C22orf23Q9BZE7 217 aa22.88■■□□□ 1.25
TRAPPC9-210ENST00000521667 LRRCC1Q9C099 1032 aa22.88■■□□□ 1.25
TRAPPC9-210ENST00000521667 POLA2Q14181 598 aa22.87■■□□□ 1.25
TRAPPC9-210ENST00000521667 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
TRAPPC9-210ENST00000521667 GLI3P10071 1580 aa22.87■■□□□ 1.25
TRAPPC9-210ENST00000521667 CDC45O75419 566 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 SLC4A3P48751 1232 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 RIC3Q7Z5B4 369 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 C9orf78Q9NZ63 289 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 CWF19L2Q2TBE0 894 aaKnown RBP22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
TRAPPC9-210ENST00000521667 COPS6Q7L5N1 327 aa22.85■■□□□ 1.25
TRAPPC9-210ENST00000521667 OSBPL3Q9H4L5 887 aa22.85■■□□□ 1.25
TRAPPC9-210ENST00000521667 SRGAP3O43295 1099 aa22.84■■□□□ 1.25
TRAPPC9-210ENST00000521667 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.24
TRAPPC9-210ENST00000521667 RAB11FIP3O75154 756 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 MTX1Q13505 466 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 BECN1Q14457 450 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 UTYO14607 1347 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 PDE1AP54750 535 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 NEXNQ0ZGT2 675 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 NRAPQ86VF7 1730 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
TRAPPC9-210ENST00000521667 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 GRM8O00222 908 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 SURF6O75683 361 aaKnown RBP22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 JCADQ9P266 1359 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 IGKV5-2P06315 115 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 ANKRD13DQ6ZTN6 518 aa22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 METTL22Q9BUU2 404 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-210ENST00000521667 TNS2Q63HR2 1409 aa22.8■■□□□ 1.24
TRAPPC9-210ENST00000521667 EIF5BO60841 1220 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-210ENST00000521667 PIP4K2AP48426 406 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC9-210ENST00000521667 RBM25P49756 843 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-210ENST00000521667 SDSP20132 328 aa22.79■■□□□ 1.24
TRAPPC9-210ENST00000521667 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
TRAPPC9-210ENST00000521667 TOGARAM1Q9Y4F4 1720 aa22.78■■□□□ 1.24
TRAPPC9-210ENST00000521667 NEURL1BA8MQ27 555 aa22.78■■□□□ 1.24
TRAPPC9-210ENST00000521667 MX1P20591 662 aa22.78■■□□□ 1.24
TRAPPC9-210ENST00000521667 HSP90AB4PQ58FF6 505 aa22.78■■□□□ 1.24
TRAPPC9-210ENST00000521667 MYD88Q99836 296 aa22.78■■□□□ 1.24
TRAPPC9-210ENST00000521667 HSPA1LP34931 641 aa22.77■■□□□ 1.24
TRAPPC9-210ENST00000521667 PTCD1O75127 700 aaKnown RBP22.76■■□□□ 1.23
TRAPPC9-210ENST00000521667 GCKRQ14397 625 aa22.76■■□□□ 1.23
TRAPPC9-210ENST00000521667 RHPN1Q8TCX5 695 aa22.76■■□□□ 1.23
TRAPPC9-210ENST00000521667 KIF1BPQ96EK5 621 aa22.76■■□□□ 1.23
TRAPPC9-210ENST00000521667 SUCLG2Q96I99 432 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms