RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PPRC1Q5VV67 1664 aaKnown RBP6.78□□□□□ -1.32
SDC2-204ENST00000519914 ADH1CP00326 375 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 GJA5P36382 358 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 PDE3BQ13370 1112 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 IRF7Q92985 503 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 LIMD1Q9UGP4 676 aa6.77□□□□□ -1.32
SDC2-204ENST00000519914 RBM19Q9Y4C8 960 aaKnown RBP6.77□□□□□ -1.32
SDC2-204ENST00000519914 KANK1Q14678 1352 aa6.77□□□□□ -1.33
SDC2-204ENST00000519914 ABCA6Q8N139 1617 aa6.77□□□□□ -1.33
SDC2-204ENST00000519914 SBNO2Q9Y2G9 1366 aa6.77□□□□□ -1.33
SDC2-204ENST00000519914 FANCIQ9NVI1 1328 aa6.77□□□□□ -1.33
SDC2-204ENST00000519914 KDM5AP29375 1690 aaKnown RBP6.77□□□□□ -1.33
SDC2-204ENST00000519914 ZIC2O95409 532 aaPredicted RBP6.76□□□□□ -1.33
SDC2-204ENST00000519914 TMF1P82094 1093 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 QPCTQ16769 361 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 TMC1Q8TDI8 760 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 FRMPD1Q5SYB0 1578 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 HECW2Q9P2P5 1572 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 MROH2AA6NES4 1674 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 ZC3H13Q5T200 1668 aaKnown RBP6.76□□□□□ -1.33
SDC2-204ENST00000519914 PPLO60437 1756 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 ERBB4Q15303 1308 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 PIK3C2GO75747 1445 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 F12P00748 615 aaPredicted RBP6.76□□□□□ -1.33
SDC2-204ENST00000519914 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 MPNDQ8N594 471 aa6.76□□□□□ -1.33
SDC2-204ENST00000519914 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
SDC2-204ENST00000519914 POGZQ7Z3K3 1410 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 NEO1Q92859 1461 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 H3BM21 787 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 NR3C2P08235 984 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 PDE4DQ08499 809 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 PRPF38BQ5VTL8 546 aaKnown RBP6.75□□□□□ -1.33
SDC2-204ENST00000519914 MYSM1Q5VVJ2 828 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 AFAP1Q8N556 730 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 ITPKCQ96DU7 683 aa6.75□□□□□ -1.33
SDC2-204ENST00000519914 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
SDC2-204ENST00000519914 PIK3C2BO00750 1634 aa6.74□□□□□ -1.33
SDC2-204ENST00000519914 ASXL1Q8IXJ9 1541 aa6.74□□□□□ -1.33
SDC2-204ENST00000519914 RGL3Q3MIN7 710 aa6.74□□□□□ -1.33
SDC2-204ENST00000519914 BPHLQ86WA6 291 aaPredicted RBP6.74□□□□□ -1.33
SDC2-204ENST00000519914 CDK15Q96Q40 435 aa6.74□□□□□ -1.33
SDC2-204ENST00000519914 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
SDC2-204ENST00000519914 USP32Q8NFA0 1604 aa6.73□□□□□ -1.33
SDC2-204ENST00000519914 GRM5P41594 1212 aa6.73□□□□□ -1.33
SDC2-204ENST00000519914 RTL5Q5HYW3 569 aaPredicted RBP6.73□□□□□ -1.33
SDC2-204ENST00000519914 NPAS3Q8IXF0 933 aa6.73□□□□□ -1.33
SDC2-204ENST00000519914 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
SDC2-204ENST00000519914 POLR3EQ9NVU0 708 aa6.73□□□□□ -1.33
SDC2-204ENST00000519914 ARHGAP31Q2M1Z3 1444 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 ABCC3O15438 1527 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 MAGEB6P1A0A0J9YX57 407 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 MAN1A2O60476 641 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 BMP2P12643 396 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 NR5A1Q13285 461 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 PANK3Q9H999 370 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 NOS1P29475 1434 aa6.72□□□□□ -1.33
SDC2-204ENST00000519914 ADGRB1O14514 1584 aa6.71□□□□□ -1.33
SDC2-204ENST00000519914 GLI2P10070 1586 aa6.71□□□□□ -1.33
SDC2-204ENST00000519914 RICTORQ6R327 1708 aa6.71□□□□□ -1.33
SDC2-204ENST00000519914 CAMSAP1Q5T5Y3 1602 aa6.71□□□□□ -1.33
SDC2-204ENST00000519914 LILRB3O75022 631 aa6.71□□□□□ -1.34
SDC2-204ENST00000519914 NPATQ14207 1427 aa6.71□□□□□ -1.34
SDC2-204ENST00000519914 CD109Q6YHK3 1445 aa6.71□□□□□ -1.34
SDC2-204ENST00000519914 PUS7Q96PZ0 661 aaKnown RBP6.71□□□□□ -1.34
SDC2-204ENST00000519914 POLR3GLQ9BT43 218 aa6.71□□□□□ -1.34
SDC2-204ENST00000519914 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
SDC2-204ENST00000519914 RPGRIP1LQ68CZ1 1315 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 SIGLEC1Q9BZZ2 1709 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 UGGT1Q9NYU2 1555 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 DIP2CQ9Y2E4 1556 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 ZFYVE9O95405 1425 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 KIF3BO15066 747 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 UPP2O95045 317 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
SDC2-204ENST00000519914 FSHRP23945 695 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 RRP1P56182 461 aaKnown RBP6.7□□□□□ -1.34
SDC2-204ENST00000519914 IRX6P78412 446 aaPredicted RBP6.7□□□□□ -1.34
SDC2-204ENST00000519914 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
SDC2-204ENST00000519914 ARMC2Q8NEN0 867 aa6.7□□□□□ -1.34
SDC2-204ENST00000519914 ZNF521Q96K83 1311 aa6.69□□□□□ -1.34
SDC2-204ENST00000519914 NGEFQ8N5V2 710 aa6.69□□□□□ -1.34
SDC2-204ENST00000519914 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
SDC2-204ENST00000519914 QRICH2Q9H0J4 1663 aa6.69□□□□□ -1.34
SDC2-204ENST00000519914 REREQ9P2R6 1566 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 ARHGEF28Q8N1W1 1705 aaKnown RBP6.68□□□□□ -1.34
SDC2-204ENST00000519914 PPP2R1AP30153 589 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 CLK2P49760 499 aaKnown RBP6.68□□□□□ -1.34
SDC2-204ENST00000519914 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 KNSTRNQ9Y448 316 aa6.68□□□□□ -1.34
SDC2-204ENST00000519914 NEXMIFQ5QGS0 1516 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms