RNA–Protein interactions for RNA: ENST00000517608.5

UBE2W-203, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 8,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-203ENST00000517608 TUBB4AP04350 444 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 CALD1Q05682 793 aaKnown RBP4.38□□□□□ -1.71
UBE2W-203ENST00000517608 WAPLQ7Z5K2 1190 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 KIAA1217Q5T5P2 1943 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 PRAM1Q96QH2 718 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 LETM1O95202 739 aaPredicted RBP4.38□□□□□ -1.71
UBE2W-203ENST00000517608 TUBBP07437 444 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 ANK1P16157 1881 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 CEBPAP49715 358 aaPredicted RBP4.38□□□□□ -1.71
UBE2W-203ENST00000517608 C8orf34Q49A92 452 aa4.38□□□□□ -1.71
UBE2W-203ENST00000517608 NAP1L5Q96NT1 182 aaPredicted RBP4.38□□□□□ -1.71
UBE2W-203ENST00000517608 PKDREJQ9NTG1 2253 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 ZNF428Q96B54 188 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 TACO1Q9BSH4 297 aaKnown RBP4.37□□□□□ -1.71
UBE2W-203ENST00000517608 TTC21AQ8NDW8 1320 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 ABCA4P78363 2273 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 KIF2CQ99661 725 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 SNRKQ9NRH2 765 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 ZNF646O15015 1829 aaPredicted RBP4.37□□□□□ -1.71
UBE2W-203ENST00000517608 MCM2P49736 904 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 NKX1-1Q15270 411 aaPredicted RBP4.37□□□□□ -1.71
UBE2W-203ENST00000517608 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 DOCK3Q8IZD9 2030 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 MAP3K19Q56UN5 1328 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 A6NNZ2 444 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 FAM161AQ3B820 660 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 TUBB8Q3ZCM7 444 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 WDR63Q8IWG1 891 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 CCDC34Q96HJ3 373 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 GTPBP4Q9BZE4 634 aaKnown RBP4.37□□□□□ -1.71
UBE2W-203ENST00000517608 PES1O00541 588 aaKnown RBP4.37□□□□□ -1.71
UBE2W-203ENST00000517608 MBD3O95983 291 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 PDIA6Q15084 440 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 HOMEZQ8IX15 550 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 LAMA4Q16363 1823 aa4.37□□□□□ -1.71
UBE2W-203ENST00000517608 IPO8O15397 1037 aaKnown RBP4.36□□□□□ -1.71
UBE2W-203ENST00000517608 WDR87Q6ZQQ6 2873 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 TEX35Q5T0J7 233 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 KIF3AQ9Y496 699 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 UTYO14607 1347 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 SCN4AP35499 1836 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 RARSP54136 660 aaKnown RBP4.36□□□□□ -1.71
UBE2W-203ENST00000517608 LTBP1Q14766 1721 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 AEBP1Q8IUX7 1158 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 BCCIPQ9P287 314 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBE2W-203ENST00000517608 ZRSR1Q15695 479 aaKnown RBP4.36□□□□□ -1.71
UBE2W-203ENST00000517608 TET1Q8NFU7 2136 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 PRIMPOLQ96LW4 560 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 KNSTRNQ9Y448 316 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 CASP7P55210 303 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 RWDD1Q9H446 243 aaPredicted RBP4.36□□□□□ -1.71
UBE2W-203ENST00000517608 HSCBQ8IWL3 235 aa4.36□□□□□ -1.71
UBE2W-203ENST00000517608 VAMP4O75379 141 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 FAM9BQ8IZU0 186 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 KAZALD1Q96I82 304 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 ATAD5Q96QE3 1844 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 GGT6Q6P531 493 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 NPM2Q86SE8 214 aaKnown RBP4.35□□□□□ -1.71
UBE2W-203ENST00000517608 AXIN2Q9Y2T1 843 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
UBE2W-203ENST00000517608 SMC5Q8IY18 1101 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 PMFBP1Q8TBY8 1022 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 DOCK6Q96HP0 2047 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 ACEP12821 1306 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 ESPNB1AK53 854 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 NUCB2P80303 420 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 FEZ1Q99689 392 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 CDK19Q9BWU1 502 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 EIF4A2Q14240 407 aaKnown RBP4.35□□□□□ -1.71
UBE2W-203ENST00000517608 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBE2W-203ENST00000517608 ANKRD36A6QL64 1941 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 TNS3Q68CZ2 1445 aa4.35□□□□□ -1.71
UBE2W-203ENST00000517608 MCCP23508 829 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 NME9Q86XW9 330 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 CCDC61Q9Y6R9 512 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 V9GYY5 206 aaPredicted RBP4.34□□□□□ -1.71
UBE2W-203ENST00000517608 FLT4P35916 1363 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 EMILIN1Q9Y6C2 1016 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 F5P12259 2224 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 CCDC173Q0VFZ6 552 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 RNF20Q5VTR2 975 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 ARHGAP45Q92619 1136 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 NUDT16Q96DE0 195 aaKnown RBP4.34□□□□□ -1.71
UBE2W-203ENST00000517608 CABP2Q9NPB3 220 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 ZBTB40Q9NUA8 1239 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 CABP1Q9NZU7 370 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 KIF13BQ9NQT8 1826 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 SSR1P43307 286 aaKnown RBP4.34□□□□□ -1.71
UBE2W-203ENST00000517608 ANTXR1Q9H6X2 564 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 NHSQ6T4R5 1651 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 EVC2Q86UK5 1308 aa4.34□□□□□ -1.71
UBE2W-203ENST00000517608 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.72
UBE2W-203ENST00000517608 FREM1Q5H8C1 2179 aa4.34□□□□□ -1.72
UBE2W-203ENST00000517608 DYSFO75923 2080 aa4.34□□□□□ -1.72
UBE2W-203ENST00000517608 TULP1O00294 542 aaPredicted RBP4.34□□□□□ -1.72
UBE2W-203ENST00000517608 HSP90B1P14625 803 aaKnown RBP4.34□□□□□ -1.72
UBE2W-203ENST00000517608 SMAP1Q8IYB5 467 aaPredicted RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms