RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
SFXN1-212ENST00000515791 PLEKHF1Q96S99 279 aa23.61■■□□□ 1.37
SFXN1-212ENST00000515791 BCL2L12Q9HB09 334 aa23.61■■□□□ 1.37
SFXN1-212ENST00000515791 PARP3Q9Y6F1 533 aa23.61■■□□□ 1.37
SFXN1-212ENST00000515791 EIF5P55010 431 aaKnown RBP23.6■■□□□ 1.37
SFXN1-212ENST00000515791 MCM10Q7L590 875 aa23.6■■□□□ 1.37
SFXN1-212ENST00000515791 NARFQ9UHQ1 456 aa23.6■■□□□ 1.37
SFXN1-212ENST00000515791 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
SFXN1-212ENST00000515791 BRCA1P38398 1863 aaKnown RBP23.6■■□□□ 1.37
SFXN1-212ENST00000515791 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
SFXN1-212ENST00000515791 A0A0G2JLW4 131 aa23.58■■□□□ 1.37
SFXN1-212ENST00000515791 BTBD11A6QL63 1104 aa23.58■■□□□ 1.37
SFXN1-212ENST00000515791 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.37
SFXN1-212ENST00000515791 KCNA3P22001 575 aa23.58■■□□□ 1.37
SFXN1-212ENST00000515791 DCTN1Q14203 1278 aa23.58■■□□□ 1.37
SFXN1-212ENST00000515791 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
SFXN1-212ENST00000515791 STARD3NLO95772 234 aa23.57■■□□□ 1.36
SFXN1-212ENST00000515791 CANXP27824 592 aaKnown RBP23.57■■□□□ 1.36
SFXN1-212ENST00000515791 FMNL2Q96PY5 1086 aa23.57■■□□□ 1.36
SFXN1-212ENST00000515791 DLG5Q8TDM6 1919 aa23.57■■□□□ 1.36
SFXN1-212ENST00000515791 ZPR1O75312 459 aa23.56■■□□□ 1.36
SFXN1-212ENST00000515791 DPEP1P16444 411 aa23.56■■□□□ 1.36
SFXN1-212ENST00000515791 TEX13AQ9BXU3 409 aaPredicted RBP23.56■■□□□ 1.36
SFXN1-212ENST00000515791 AFDNP55196 1824 aaKnown RBP23.55■■□□□ 1.36
SFXN1-212ENST00000515791 DDX10Q13206 875 aaKnown RBP23.55■■□□□ 1.36
SFXN1-212ENST00000515791 ADCY9O60503 1353 aa23.54■■□□□ 1.36
SFXN1-212ENST00000515791 NFIXQ14938 502 aa23.54■■□□□ 1.36
SFXN1-212ENST00000515791 RALBP1Q15311 655 aa23.54■■□□□ 1.36
SFXN1-212ENST00000515791 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
SFXN1-212ENST00000515791 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
SFXN1-212ENST00000515791 USP16Q9Y5T5 823 aa23.53■■□□□ 1.36
SFXN1-212ENST00000515791 A1BGP04217 495 aa23.52■■□□□ 1.36
SFXN1-212ENST00000515791 IL6STP40189 918 aaPredicted RBP23.52■■□□□ 1.36
SFXN1-212ENST00000515791 SCN7AQ01118 1682 aa23.51■■□□□ 1.35
SFXN1-212ENST00000515791 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
SFXN1-212ENST00000515791 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
SFXN1-212ENST00000515791 ATP10DQ9P241 1426 aa23.49■■□□□ 1.35
SFXN1-212ENST00000515791 KDM3BQ7LBC6 1761 aa23.48■■□□□ 1.35
SFXN1-212ENST00000515791 A0A087WZG4 1122 aa23.48■■□□□ 1.35
SFXN1-212ENST00000515791 NFE2L2Q16236 605 aa23.48■■□□□ 1.35
SFXN1-212ENST00000515791 BCS1LQ9Y276 419 aa23.48■■□□□ 1.35
SFXN1-212ENST00000515791 SERPINB2P05120 415 aa23.47■■□□□ 1.35
SFXN1-212ENST00000515791 SNRPA1P09661 255 aaKnown RBP23.46■■□□□ 1.35
SFXN1-212ENST00000515791 CHRNA5P30532 468 aa23.46■■□□□ 1.35
SFXN1-212ENST00000515791 BCORQ6W2J9 1755 aa23.46■■□□□ 1.35
SFXN1-212ENST00000515791 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
SFXN1-212ENST00000515791 TBC1D2BQ9UPU7 963 aa23.46■■□□□ 1.35
SFXN1-212ENST00000515791 MYBBP1AQ9BQG0 1328 aaKnown RBP23.45■■□□□ 1.34
SFXN1-212ENST00000515791 CAMTA2O94983 1202 aa23.45■■□□□ 1.34
SFXN1-212ENST00000515791 TBC1D9BQ66K14 1250 aa23.45■■□□□ 1.34
SFXN1-212ENST00000515791 CARMIL3Q8ND23 1372 aa23.44■■□□□ 1.34
SFXN1-212ENST00000515791 NBPF26B4DH59 902 aa23.44■■□□□ 1.34
SFXN1-212ENST00000515791 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
SFXN1-212ENST00000515791 NBPF10Q6P3W6 841 aaKnown RBP23.44■■□□□ 1.34
SFXN1-212ENST00000515791 NBPF15Q8N660 670 aa23.44■■□□□ 1.34
SFXN1-212ENST00000515791 PIM2Q9P1W9 311 aa23.44■■□□□ 1.34
SFXN1-212ENST00000515791 DLEC1Q9Y238 1755 aa23.43■■□□□ 1.34
SFXN1-212ENST00000515791 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
SFXN1-212ENST00000515791 NEFMP07197 916 aa23.42■■□□□ 1.34
SFXN1-212ENST00000515791 PNNQ9H307 717 aaKnown RBP23.42■■□□□ 1.34
SFXN1-212ENST00000515791 LAMB4A4D0S4 1761 aa23.42■■□□□ 1.34
SFXN1-212ENST00000515791 ANKRD31Q8N7Z5 1873 aa23.41■■□□□ 1.34
SFXN1-212ENST00000515791 C1QTNF8P60827 252 aa23.41■■□□□ 1.34
SFXN1-212ENST00000515791 BICDL1Q6ZP65 573 aa23.41■■□□□ 1.34
SFXN1-212ENST00000515791 ZNF330Q9Y3S2 320 aaPredicted RBP23.41■■□□□ 1.34
SFXN1-212ENST00000515791 DALRD3Q5D0E6 543 aaKnown RBP23.4■■□□□ 1.34
SFXN1-212ENST00000515791 EIF4A1P60842 406 aaKnown RBP23.39■■□□□ 1.33
SFXN1-212ENST00000515791 ARHGAP27Q6ZUM4 889 aa23.39■■□□□ 1.33
SFXN1-212ENST00000515791 DZIP3Q86Y13 1208 aaKnown RBP23.39■■□□□ 1.33
SFXN1-212ENST00000515791 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.33
SFXN1-212ENST00000515791 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
SFXN1-212ENST00000515791 GIGYF1O75420 1035 aaPredicted RBP23.38■■□□□ 1.33
SFXN1-212ENST00000515791 PRR5LQ6MZQ0 368 aa23.37■■□□□ 1.33
SFXN1-212ENST00000515791 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
SFXN1-212ENST00000515791 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
SFXN1-212ENST00000515791 RIPK4P57078 832 aa23.35■■□□□ 1.33
SFXN1-212ENST00000515791 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
SFXN1-212ENST00000515791 COL11A2P13942 1736 aaPredicted RBP23.34■■□□□ 1.33
SFXN1-212ENST00000515791 BRIP1Q9BX63 1249 aa23.34■■□□□ 1.33
SFXN1-212ENST00000515791 GPBP1L1Q9HC44 474 aaPredicted RBP23.34■■□□□ 1.33
SFXN1-212ENST00000515791 SBF1O95248 1867 aa23.33■■□□□ 1.33
SFXN1-212ENST00000515791 RGL2O15211 777 aa23.33■■□□□ 1.33
SFXN1-212ENST00000515791 C2CD5Q86YS7 1000 aa23.33■■□□□ 1.33
SFXN1-212ENST00000515791 CCDC24Q8N4L8 307 aa23.33■■□□□ 1.33
SFXN1-212ENST00000515791 SETDB2Q96T68 719 aa23.33■■□□□ 1.33
SFXN1-212ENST00000515791 ZNF526Q8TF50 670 aaPredicted RBP23.32■■□□□ 1.32
SFXN1-212ENST00000515791 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
SFXN1-212ENST00000515791 CCDC146Q8IYE0 955 aa23.31■■□□□ 1.32
SFXN1-212ENST00000515791 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
SFXN1-212ENST00000515791 H0YIN7 160 aa23.3■■□□□ 1.32
SFXN1-212ENST00000515791 HLFQ16534 295 aa23.3■■□□□ 1.32
SFXN1-212ENST00000515791 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
SFXN1-212ENST00000515791 TTLL6Q8N841 843 aa23.3■■□□□ 1.32
SFXN1-212ENST00000515791 KIF3CO14782 793 aa23.29■■□□□ 1.32
SFXN1-212ENST00000515791 PRELPP51888 382 aa23.29■■□□□ 1.32
SFXN1-212ENST00000515791 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
SFXN1-212ENST00000515791 TRIM35Q9UPQ4 493 aa23.29■■□□□ 1.32
SFXN1-212ENST00000515791 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
SFXN1-212ENST00000515791 PDE6BP35913 854 aa23.28■■□□□ 1.32
SFXN1-212ENST00000515791 CNBD1Q8NA66 436 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms