RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
COPG1-210ENST00000515725 NFAT5O94916 1531 aa11.32□□□□□ -0.6
COPG1-210ENST00000515725 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
COPG1-210ENST00000515725 STARD3NLO95772 234 aa11.32□□□□□ -0.6
COPG1-210ENST00000515725 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
COPG1-210ENST00000515725 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
COPG1-210ENST00000515725 SPATA31A1Q5TZJ5 1347 aa11.32□□□□□ -0.6
COPG1-210ENST00000515725 A0A087WZG4 1122 aa11.31□□□□□ -0.6
COPG1-210ENST00000515725 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
COPG1-210ENST00000515725 CPDO75976 1380 aa11.31□□□□□ -0.6
COPG1-210ENST00000515725 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
COPG1-210ENST00000515725 GNAI2P04899 355 aa11.31□□□□□ -0.6
COPG1-210ENST00000515725 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
COPG1-210ENST00000515725 LTN1O94822 1766 aa11.31□□□□□ -0.6
COPG1-210ENST00000515725 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
COPG1-210ENST00000515725 TAF7LQ5H9L4 462 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
COPG1-210ENST00000515725 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
COPG1-210ENST00000515725 KIF6Q6ZMV9 814 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPG1-210ENST00000515725 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
COPG1-210ENST00000515725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■■□□□ 13.3
COPG1-210ENST00000515725 RBM19Q9Y4C8 960 aaKnown RBP11.3□□□□□ -0.6
COPG1-210ENST00000515725 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
COPG1-210ENST00000515725 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
COPG1-210ENST00000515725 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
COPG1-210ENST00000515725 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
COPG1-210ENST00000515725 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
COPG1-210ENST00000515725 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 SYNE4Q8N205 404 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 SPATA31A5Q5VU36 1347 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 SPATA31A7Q8IWB4 1347 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 ANKRD26Q9UPS8 1709 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
COPG1-210ENST00000515725 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
COPG1-210ENST00000515725 UTRNP46939 3433 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 PNMA6EA0A0J9YXQ4 647 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 HMMRO75330 724 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 SIK1P57059 783 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 RILPL2Q969X0 211 aa11.28□□□□□ -0.6
COPG1-210ENST00000515725 GNAI3P08754 354 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 PTPRCP08575 1304 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 GNPATO15228 680 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
COPG1-210ENST00000515725 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 NBPF10Q6P3W6 841 aaKnown RBP11.27□□□□□ -0.61
COPG1-210ENST00000515725 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 NBPF15Q8N660 670 aa11.27□□□□□ -0.61
COPG1-210ENST00000515725 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
COPG1-210ENST00000515725 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.61
COPG1-210ENST00000515725 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 UBE2Q2Q8WVN8 375 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 PDE4AP27815 886 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 DZIP3Q86Y13 1208 aaKnown RBP11.26□□□□□ -0.61
COPG1-210ENST00000515725 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
COPG1-210ENST00000515725 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
COPG1-210ENST00000515725 TRMT112Q9UI30 125 aaKnown RBP11.25□□□□□ -0.61
COPG1-210ENST00000515725 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
COPG1-210ENST00000515725 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
COPG1-210ENST00000515725 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
COPG1-210ENST00000515725 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
COPG1-210ENST00000515725 XIRP1Q702N8 1843 aaKnown RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 VPS72Q15906 364 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 PPP1R1BQ9UD71 204 aaPredicted RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 APBA3O96018 575 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 HLFQ16534 295 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 CEP85Q6P2H3 762 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 KRT27Q7Z3Y8 459 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 SIRT2Q8IXJ6 389 aa11.24□□□□□ -0.61
COPG1-210ENST00000515725 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
COPG1-210ENST00000515725 GRM8O00222 908 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
COPG1-210ENST00000515725 SLIT3O75094 1523 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 RXRBP28702 533 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.615e-7■■■■□ 19.4
COPG1-210ENST00000515725 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
COPG1-210ENST00000515725 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
COPG1-210ENST00000515725 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
COPG1-210ENST00000515725 NIP7Q9Y221 180 aaKnown RBP eCLIP11.23□□□□□ -0.61
COPG1-210ENST00000515725 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
COPG1-210ENST00000515725 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
COPG1-210ENST00000515725 SUCLG2Q96I99 432 aa11.22□□□□□ -0.61
COPG1-210ENST00000515725 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms