RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 PALD1Q9ULE6 856 aa21.33■■□□□ 1.01
SNX2-213ENST00000514949 SLIT3O75094 1523 aa21.32■■□□□ 1
SNX2-213ENST00000514949 PLEKHO1Q53GL0 409 aaPredicted RBP21.32■■□□□ 1
SNX2-213ENST00000514949 PI4K2BQ8TCG2 481 aa21.32■■□□□ 1
SNX2-213ENST00000514949 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
SNX2-213ENST00000514949 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
SNX2-213ENST00000514949 PSME1Q06323 249 aa21.32■■□□□ 1
SNX2-213ENST00000514949 MTX1Q13505 466 aa21.32■■□□□ 1
SNX2-213ENST00000514949 ANO2Q9NQ90 1003 aa21.32■■□□□ 1
SNX2-213ENST00000514949 CHPF2Q9P2E5 772 aa21.32■■□□□ 1
SNX2-213ENST00000514949 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
SNX2-213ENST00000514949 RGPD2P0DJD1 1756 aa21.31■■□□□ 1
SNX2-213ENST00000514949 HSP90AB4PQ58FF6 505 aa21.31■■□□□ 1
SNX2-213ENST00000514949 CRYBG1Q9Y4K1 1723 aa21.31■■□□□ 1
SNX2-213ENST00000514949 PI4KAP2A4QPH2 592 aa21.31■■□□□ 1
SNX2-213ENST00000514949 HSPA4P34932 840 aa21.31■■□□□ 1
SNX2-213ENST00000514949 PI4KAP1Q8N8J0 262 aa21.31■■□□□ 1
SNX2-213ENST00000514949 PPP1R9BQ96SB3 815 aa21.31■■□□□ 1
SNX2-213ENST00000514949 ADCY9O60503 1353 aa21.3■■□□□ 1
SNX2-213ENST00000514949 SRGAP3O43295 1099 aa21.3■■□□□ 1
SNX2-213ENST00000514949 NBPF7P0C2Y1 421 aaPredicted RBP21.3■■□□□ 1
SNX2-213ENST00000514949 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
SNX2-213ENST00000514949 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
SNX2-213ENST00000514949 CAMTA1Q9Y6Y1 1673 aa21.3■■□□□ 1
SNX2-213ENST00000514949 BRD1O95696 1058 aa21.29■■□□□ 1
SNX2-213ENST00000514949 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
SNX2-213ENST00000514949 TEFQ10587 303 aa21.29■■□□□ 1
SNX2-213ENST00000514949 BTBD11A6QL63 1104 aa21.29■■□□□ 1
SNX2-213ENST00000514949 ZNF530Q6P9A1 599 aaPredicted RBP21.29■■□□□ 1
SNX2-213ENST00000514949 DBF4Q9UBU7 674 aaPredicted RBP21.29■■□□□ 1
SNX2-213ENST00000514949 KCNQ3O43525 872 aa21.28■■□□□ 1
SNX2-213ENST00000514949 ESCO1Q5FWF5 840 aa21.28■■□□□ 1
SNX2-213ENST00000514949 ALDH1L1O75891 902 aa21.28■■□□□ 1
SNX2-213ENST00000514949 CCDC173Q0VFZ6 552 aa21.28■■□□□ 1
SNX2-213ENST00000514949 ZSCAN23Q3MJ62 389 aa21.28■■□□□ 1
SNX2-213ENST00000514949 SGSM2O43147 1006 aa21.27■■□□□ 1
SNX2-213ENST00000514949 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
SNX2-213ENST00000514949 PLEKHG5O94827 1062 aa21.27■■□□□ 1
SNX2-213ENST00000514949 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
SNX2-213ENST00000514949 SETD1BQ9UPS6 1966 aaKnown RBP21.27■■□□□ 1
SNX2-213ENST00000514949 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 TTC41PQ6P2S7 1318 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 NASPP49321 788 aaPredicted RBP21.26■□□□□ 0.99
SNX2-213ENST00000514949 RAD50Q92878 1312 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 ESPNB1AK53 854 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 GCP02774 474 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 IL25Q9H293 177 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 HDAC5Q9UQL6 1122 aa21.26■□□□□ 0.99
SNX2-213ENST00000514949 PRPF40AO75400 957 aaKnown RBP21.25■□□□□ 0.99
SNX2-213ENST00000514949 GPT2Q8TD30 523 aa21.25■□□□□ 0.99
SNX2-213ENST00000514949 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
SNX2-213ENST00000514949 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
SNX2-213ENST00000514949 CAVIN1Q6NZI2 390 aaKnown RBP21.25■□□□□ 0.99
SNX2-213ENST00000514949 CNTROBQ8N137 903 aa21.25■□□□□ 0.99
SNX2-213ENST00000514949 LRRC59Q96AG4 307 aaKnown RBP21.25■□□□□ 0.99
SNX2-213ENST00000514949 PXDNQ92626 1479 aa21.24■□□□□ 0.99
SNX2-213ENST00000514949 MST1RQ04912 1400 aa21.24■□□□□ 0.99
SNX2-213ENST00000514949 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
SNX2-213ENST00000514949 MBD3O95983 291 aa21.23■□□□□ 0.99
SNX2-213ENST00000514949 C1orf141Q5JVX7 400 aa21.23■□□□□ 0.99
SNX2-213ENST00000514949 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
SNX2-213ENST00000514949 TRIM44Q96DX7 344 aaPredicted RBP21.23■□□□□ 0.99
SNX2-213ENST00000514949 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
SNX2-213ENST00000514949 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
SNX2-213ENST00000514949 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
SNX2-213ENST00000514949 TRPM3Q9HCF6 1732 aaPredicted RBP21.22■□□□□ 0.99
SNX2-213ENST00000514949 UTYO14607 1347 aa21.21■□□□□ 0.99
SNX2-213ENST00000514949 ERBB4Q15303 1308 aa21.2■□□□□ 0.98
SNX2-213ENST00000514949 ERC1Q8IUD2 1116 aa21.2■□□□□ 0.98
SNX2-213ENST00000514949 ANKRD24Q8TF21 1146 aa21.2■□□□□ 0.98
SNX2-213ENST00000514949 ANP32BQ92688 251 aaKnown RBP21.2■□□□□ 0.98
SNX2-213ENST00000514949 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
SNX2-213ENST00000514949 TTC14Q96N46 770 aa21.2■□□□□ 0.98
SNX2-213ENST00000514949 HYPKQ9NX55 129 aa21.2■□□□□ 0.98
SNX2-213ENST00000514949 UPF3BQ9BZI7 483 aaKnown RBP21.19■□□□□ 0.98
SNX2-213ENST00000514949 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.19■□□□□ 0.98
SNX2-213ENST00000514949 MAP3K2Q9Y2U5 619 aa21.19■□□□□ 0.98
SNX2-213ENST00000514949 NPHP4O75161 1426 aaPredicted RBP21.19■□□□□ 0.98
SNX2-213ENST00000514949 ANXA1P04083 346 aa21.19■□□□□ 0.98
SNX2-213ENST00000514949 NCLP19338 710 aaKnown RBP21.19■□□□□ 0.98
SNX2-213ENST00000514949 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
SNX2-213ENST00000514949 SNX14Q9Y5W7 946 aa21.19■□□□□ 0.98
SNX2-213ENST00000514949 ORAI2Q96SN7 254 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 HS1BP3Q53T59 392 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 LRSAM1Q6UWE0 723 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 LINS1Q8NG48 757 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 KCNB2Q92953 911 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 ECHDC1Q9NTX5 307 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 C9orf78Q9NZ63 289 aaPredicted RBP21.17■□□□□ 0.98
SNX2-213ENST00000514949 TMEM63CQ9P1W3 806 aa21.17■□□□□ 0.98
SNX2-213ENST00000514949 WDR33Q9C0J8 1336 aaKnown RBP21.17■□□□□ 0.98
SNX2-213ENST00000514949 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
SNX2-213ENST00000514949 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
SNX2-213ENST00000514949 PDLIM2Q96JY6 352 aa21.16■□□□□ 0.98
SNX2-213ENST00000514949 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNX2-213ENST00000514949 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
SNX2-213ENST00000514949 MAP4K4O95819 1239 aaPredicted RBP21.16■□□□□ 0.98
SNX2-213ENST00000514949 RUFY2Q8WXA3 655 aa21.16■□□□□ 0.98
SNX2-213ENST00000514949 RBSNQ9H1K0 784 aa21.16■□□□□ 0.98
SNX2-213ENST00000514949 KIF1AQ12756 1690 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms