RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CABP4P57796 275 aa18.64■□□□□ 0.57
VCAN-211ENST00000513984 BMP2KLQ5H9B9 411 aa18.64■□□□□ 0.57
VCAN-211ENST00000513984 BEND3Q5T5X7 828 aa18.64■□□□□ 0.57
VCAN-211ENST00000513984 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
VCAN-211ENST00000513984 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
VCAN-211ENST00000513984 PDIA6Q15084 440 aa18.63■□□□□ 0.57
VCAN-211ENST00000513984 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
VCAN-211ENST00000513984 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
VCAN-211ENST00000513984 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
VCAN-211ENST00000513984 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
VCAN-211ENST00000513984 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
VCAN-211ENST00000513984 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
VCAN-211ENST00000513984 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
VCAN-211ENST00000513984 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
VCAN-211ENST00000513984 LRRFIP2Q9Y608 721 aaKnown RBP18.61■□□□□ 0.57
VCAN-211ENST00000513984 NRAPQ86VF7 1730 aa18.61■□□□□ 0.57
VCAN-211ENST00000513984 ITGB4P16144 1822 aa18.61■□□□□ 0.57
VCAN-211ENST00000513984 ERICH6Q7L0X2 663 aa18.6■□□□□ 0.57
VCAN-211ENST00000513984 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
VCAN-211ENST00000513984 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
VCAN-211ENST00000513984 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
VCAN-211ENST00000513984 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
VCAN-211ENST00000513984 IBTKQ9P2D0 1353 aaPredicted RBP18.59■□□□□ 0.57
VCAN-211ENST00000513984 ALDH1L1O75891 902 aa18.59■□□□□ 0.57
VCAN-211ENST00000513984 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
VCAN-211ENST00000513984 UPF2Q9HAU5 1272 aaKnown RBP18.59■□□□□ 0.57
VCAN-211ENST00000513984 MAP3K2Q9Y2U5 619 aa18.59■□□□□ 0.57
VCAN-211ENST00000513984 PNMA6EA0A0J9YXQ4 647 aa18.58■□□□□ 0.57
VCAN-211ENST00000513984 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.57
VCAN-211ENST00000513984 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
VCAN-211ENST00000513984 TNS2Q63HR2 1409 aa18.58■□□□□ 0.56
VCAN-211ENST00000513984 LRP6O75581 1613 aa18.57■□□□□ 0.56
VCAN-211ENST00000513984 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
VCAN-211ENST00000513984 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
VCAN-211ENST00000513984 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
VCAN-211ENST00000513984 NBPF7P0C2Y1 421 aaPredicted RBP18.56■□□□□ 0.56
VCAN-211ENST00000513984 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
VCAN-211ENST00000513984 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
VCAN-211ENST00000513984 NWD2Q9ULI1 1742 aa18.55■□□□□ 0.56
VCAN-211ENST00000513984 POLA2Q14181 598 aa18.55■□□□□ 0.56
VCAN-211ENST00000513984 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
VCAN-211ENST00000513984 ANP32EQ9BTT0 268 aa18.55■□□□□ 0.56
VCAN-211ENST00000513984 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
VCAN-211ENST00000513984 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
VCAN-211ENST00000513984 SMARCA5O60264 1052 aaPredicted RBP18.54■□□□□ 0.56
VCAN-211ENST00000513984 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
VCAN-211ENST00000513984 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
VCAN-211ENST00000513984 GSPT1P15170 499 aaKnown RBP18.53■□□□□ 0.56
VCAN-211ENST00000513984 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
VCAN-211ENST00000513984 EXOC6BQ9Y2D4 811 aa18.53■□□□□ 0.56
VCAN-211ENST00000513984 UTYO14607 1347 aa18.53■□□□□ 0.56
VCAN-211ENST00000513984 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
VCAN-211ENST00000513984 APBB1O00213 710 aa18.52■□□□□ 0.56
VCAN-211ENST00000513984 MYL6BP14649 208 aa18.52■□□□□ 0.56
VCAN-211ENST00000513984 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.56
VCAN-211ENST00000513984 PPP1R42Q7Z4L9 355 aa18.52■□□□□ 0.56
VCAN-211ENST00000513984 OTUD7AQ8TE49 926 aaPredicted RBP18.52■□□□□ 0.56
VCAN-211ENST00000513984 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
VCAN-211ENST00000513984 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
VCAN-211ENST00000513984 MTX1Q13505 466 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 COPS6Q7L5N1 327 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 SALL3Q9BXA9 1300 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 TOM1O60784 492 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 MFAP1P55081 439 aaKnown RBP18.51■□□□□ 0.55
VCAN-211ENST00000513984 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
VCAN-211ENST00000513984 RIC3Q7Z5B4 369 aa18.51■□□□□ 0.55
VCAN-211ENST00000513984 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
VCAN-211ENST00000513984 GRM8O00222 908 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 CDC45O75419 566 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 TBC1D9Q6ZT07 1266 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 METTL22Q9BUU2 404 aaPredicted RBP18.49■□□□□ 0.55
VCAN-211ENST00000513984 KAT6BQ8WYB5 2073 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 RAB11FIP3O75154 756 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 C22orf23Q9BZE7 217 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
VCAN-211ENST00000513984 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
VCAN-211ENST00000513984 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
VCAN-211ENST00000513984 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
VCAN-211ENST00000513984 PDE1AP54750 535 aa18.47■□□□□ 0.55
VCAN-211ENST00000513984 NBPF26B4DH59 902 aa18.46■□□□□ 0.55
VCAN-211ENST00000513984 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
VCAN-211ENST00000513984 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
VCAN-211ENST00000513984 NBPF10Q6P3W6 841 aaKnown RBP18.46■□□□□ 0.55
VCAN-211ENST00000513984 NBPF15Q8N660 670 aa18.46■□□□□ 0.55
VCAN-211ENST00000513984 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.54
VCAN-211ENST00000513984 SLIT2O94813 1529 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
VCAN-211ENST00000513984 SURF6O75683 361 aaKnown RBP18.45■□□□□ 0.54
VCAN-211ENST00000513984 GCKRQ14397 625 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 HSP90AB4PQ58FF6 505 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 PLBD2Q8NHP8 589 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 MYD88Q99836 296 aa18.45■□□□□ 0.54
VCAN-211ENST00000513984 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
VCAN-211ENST00000513984 THRAP3Q9Y2W1 955 aaKnown RBP18.45■□□□□ 0.54
VCAN-211ENST00000513984 TJP1Q07157 1748 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms