RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 C1orf141Q5JVX7 400 aa17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 GAS2L3Q86XJ1 694 aa17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 ZGPATQ8N5A5 531 aaKnown RBP17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 INTS4Q96HW7 963 aaKnown RBP17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 RRAGDQ9NQL2 400 aaPredicted RBP17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
AP003555.1-202ENST00000511013 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 LMBRD1Q9NUN5 540 aa17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
AP003555.1-202ENST00000511013 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
AP003555.1-202ENST00000511013 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
AP003555.1-202ENST00000511013 ZNF445P59923 1031 aa17.3■□□□□ 0.36
AP003555.1-202ENST00000511013 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
AP003555.1-202ENST00000511013 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
AP003555.1-202ENST00000511013 SLIT3O75094 1523 aa17.29■□□□□ 0.36
AP003555.1-202ENST00000511013 GCP02774 474 aa17.29■□□□□ 0.36
AP003555.1-202ENST00000511013 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
AP003555.1-202ENST00000511013 MTX1Q13505 466 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 UNC5CLQ8IV45 518 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 KCNQ3O43525 872 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 PKP1Q13835 747 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
AP003555.1-202ENST00000511013 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
AP003555.1-202ENST00000511013 HSPA4P34932 840 aa17.27■□□□□ 0.35
AP003555.1-202ENST00000511013 CLCN1P35523 988 aa17.27■□□□□ 0.35
AP003555.1-202ENST00000511013 PALD1Q9ULE6 856 aa17.27■□□□□ 0.35
AP003555.1-202ENST00000511013 ADCY9O60503 1353 aa17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 ERC1Q8IUD2 1116 aa17.26■□□□□ 0.35
AP003555.1-202ENST00000511013 SGSM2O43147 1006 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 ANKRD24Q8TF21 1146 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 LMTK3Q96Q04 1460 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 BRD1O95696 1058 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 RBM33Q96EV2 1170 aaKnown RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
AP003555.1-202ENST00000511013 MBD3O95983 291 aa17.24■□□□□ 0.35
AP003555.1-202ENST00000511013 ZSCAN23Q3MJ62 389 aa17.24■□□□□ 0.35
AP003555.1-202ENST00000511013 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
AP003555.1-202ENST00000511013 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
AP003555.1-202ENST00000511013 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
AP003555.1-202ENST00000511013 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 RAD50Q92878 1312 aa17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 ESPNB1AK53 854 aa17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 ORAI2Q96SN7 254 aa17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
AP003555.1-202ENST00000511013 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
AP003555.1-202ENST00000511013 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
AP003555.1-202ENST00000511013 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 KIF1AQ12756 1690 aa17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 ANXA1P04083 346 aa17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
AP003555.1-202ENST00000511013 PXDNQ92626 1479 aa17.21■□□□□ 0.34
AP003555.1-202ENST00000511013 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 DIAPH3Q9NSV4 1193 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 TRPM3Q9HCF6 1732 aaPredicted RBP17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 SNX14Q9Y5W7 946 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
AP003555.1-202ENST00000511013 UTYO14607 1347 aa17.19■□□□□ 0.34
AP003555.1-202ENST00000511013 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
AP003555.1-202ENST00000511013 MST1RQ04912 1400 aa17.19■□□□□ 0.34
AP003555.1-202ENST00000511013 ADAMTSL3P82987 1691 aa17.19■□□□□ 0.34
AP003555.1-202ENST00000511013 NOL8Q76FK4 1167 aaKnown RBP17.18■□□□□ 0.34
AP003555.1-202ENST00000511013 IL25Q9H293 177 aa17.18■□□□□ 0.34
AP003555.1-202ENST00000511013 GRM8O00222 908 aa17.17■□□□□ 0.34
AP003555.1-202ENST00000511013 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms