RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PHF14O94880 888 aa11.87□□□□□ -0.51
PDPN-209ENST00000510906 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
PDPN-209ENST00000510906 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
PDPN-209ENST00000510906 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
PDPN-209ENST00000510906 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
PDPN-209ENST00000510906 PCDHGA4Q9Y5G9 962 aa11.86□□□□□ -0.51
PDPN-209ENST00000510906 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
PDPN-209ENST00000510906 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
PDPN-209ENST00000510906 INSRP06213 1382 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 FLT4P35916 1363 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 FECHP22830 423 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 AMHR2Q16671 573 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 DDX54Q8TDD1 881 aaKnown RBP11.85□□□□□ -0.51
PDPN-209ENST00000510906 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 EPAS1Q99814 870 aa11.85□□□□□ -0.51
PDPN-209ENST00000510906 RREB1Q92766 1687 aa11.84□□□□□ -0.51
PDPN-209ENST00000510906 KIF20BQ96Q89 1820 aa11.84□□□□□ -0.51
PDPN-209ENST00000510906 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
PDPN-209ENST00000510906 PANK3Q9H999 370 aa11.84□□□□□ -0.51
PDPN-209ENST00000510906 MEGF6O75095 1541 aa11.84□□□□□ -0.51
PDPN-209ENST00000510906 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
PDPN-209ENST00000510906 SBF2Q86WG5 1849 aa11.83□□□□□ -0.51
PDPN-209ENST00000510906 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
PDPN-209ENST00000510906 KIF24Q5T7B8 1368 aa11.83□□□□□ -0.52
PDPN-209ENST00000510906 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
PDPN-209ENST00000510906 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
PDPN-209ENST00000510906 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
PDPN-209ENST00000510906 TXNRD1Q16881 649 aa11.82□□□□□ -0.52
PDPN-209ENST00000510906 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
PDPN-209ENST00000510906 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
PDPN-209ENST00000510906 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
PDPN-209ENST00000510906 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
PDPN-209ENST00000510906 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
PDPN-209ENST00000510906 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
PDPN-209ENST00000510906 TATP17735 454 aaPredicted RBP11.8□□□□□ -0.52
PDPN-209ENST00000510906 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
PDPN-209ENST00000510906 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
PDPN-209ENST00000510906 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
PDPN-209ENST00000510906 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
PDPN-209ENST00000510906 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
PDPN-209ENST00000510906 RGPD2P0DJD1 1756 aa11.79□□□□□ -0.52
PDPN-209ENST00000510906 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
PDPN-209ENST00000510906 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
PDPN-209ENST00000510906 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
PDPN-209ENST00000510906 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
PDPN-209ENST00000510906 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
PDPN-209ENST00000510906 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
PDPN-209ENST00000510906 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
PDPN-209ENST00000510906 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
PDPN-209ENST00000510906 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
PDPN-209ENST00000510906 EYA1Q99502 592 aa11.77□□□□□ -0.53
PDPN-209ENST00000510906 NSD2O96028 1365 aa11.77□□□□□ -0.53
PDPN-209ENST00000510906 NCAPD2Q15021 1401 aa11.77□□□□□ -0.53
PDPN-209ENST00000510906 MAP3K7O43318 606 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
PDPN-209ENST00000510906 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
PDPN-209ENST00000510906 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
PDPN-209ENST00000510906 CYP27B1O15528 508 aa11.75□□□□□ -0.53
PDPN-209ENST00000510906 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
PDPN-209ENST00000510906 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
PDPN-209ENST00000510906 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
PDPN-209ENST00000510906 BTAF1O14981 1849 aa11.74□□□□□ -0.53
PDPN-209ENST00000510906 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
PDPN-209ENST00000510906 FOSBP53539 338 aa11.74□□□□□ -0.53
PDPN-209ENST00000510906 KCNQ4P56696 695 aa11.74□□□□□ -0.53
PDPN-209ENST00000510906 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
PDPN-209ENST00000510906 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
PDPN-209ENST00000510906 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
PDPN-209ENST00000510906 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
PDPN-209ENST00000510906 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
PDPN-209ENST00000510906 DOT1LQ8TEK3 1739 aa11.73□□□□□ -0.53
PDPN-209ENST00000510906 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
PDPN-209ENST00000510906 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
PDPN-209ENST00000510906 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
PDPN-209ENST00000510906 ZSWIM6Q9HCJ5 1215 aa11.72□□□□□ -0.53
PDPN-209ENST00000510906 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
PDPN-209ENST00000510906 PAPPAQ13219 1627 aa11.71□□□□□ -0.53
PDPN-209ENST00000510906 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
PDPN-209ENST00000510906 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
PDPN-209ENST00000510906 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
PDPN-209ENST00000510906 SPG7Q9UQ90 795 aa11.71□□□□□ -0.53
PDPN-209ENST00000510906 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.54
PDPN-209ENST00000510906 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
PDPN-209ENST00000510906 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
PDPN-209ENST00000510906 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
PDPN-209ENST00000510906 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
PDPN-209ENST00000510906 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
PDPN-209ENST00000510906 PHKG2P15735 406 aa11.69□□□□□ -0.54
PDPN-209ENST00000510906 CC2D1BQ5T0F9 858 aaKnown RBP11.69□□□□□ -0.54
PDPN-209ENST00000510906 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
PDPN-209ENST00000510906 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
PDPN-209ENST00000510906 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
PDPN-209ENST00000510906 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
PDPN-209ENST00000510906 PIGBQ92521 554 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms