RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 ODF2Q5BJF6 829 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 UBE3BQ7Z3V4 1068 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 TFCP2L1Q9NZI6 479 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 YTHDC2Q9H6S0 1430 aaKnown RBP8.47□□□□□ -1.05
KDM3B-207ENST00000510866 PI4KAP2A4QPH2 592 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 PI4KAP1Q8N8J0 262 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 GCP02774 474 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 ANKRD13DQ6ZTN6 518 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 CHPF2Q9P2E5 772 aa8.47□□□□□ -1.05
KDM3B-207ENST00000510866 OFD1O75665 1012 aa8.46□□□□□ -1.05
KDM3B-207ENST00000510866 ZNF444Q8N0Y2 327 aaPredicted RBP8.46□□□□□ -1.05
KDM3B-207ENST00000510866 MAGEC2Q9UBF1 373 aaPredicted RBP8.46□□□□□ -1.05
KDM3B-207ENST00000510866 SEC63Q9UGP8 760 aaKnown RBP8.46□□□□□ -1.05
KDM3B-207ENST00000510866 POLD1P28340 1107 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 JMYQ8N9B5 988 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 SIRT1Q96EB6 747 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 FLT4P35916 1363 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 PDILTQ8N807 584 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 FIBPO43427 364 aa8.46□□□□□ -1.06
KDM3B-207ENST00000510866 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
KDM3B-207ENST00000510866 DNMT1P26358 1616 aaKnown RBP8.46□□□□□ -1.06
KDM3B-207ENST00000510866 CCDC96Q2M329 555 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 CASTP20810 708 aaKnown RBP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 PIP4K2AP48426 406 aaPredicted RBP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 HOMER1Q86YM7 354 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 WASF1Q92558 559 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 NIP7Q9Y221 180 aaKnown RBP eCLIP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 RANBP6O60518 1105 aaKnown RBP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 WDR78Q5VTH9 848 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 LARP1BQ659C4 914 aaKnown RBP8.45□□□□□ -1.06
KDM3B-207ENST00000510866 ANKRD18AQ8IVF6 992 aa8.45□□□□□ -1.06
KDM3B-207ENST00000510866 NFATC2IPQ8NCF5 419 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 IBSPP21815 317 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 HOXC9P31274 260 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 PRPF40BQ6NWY9 871 aaKnown RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 COPS6Q7L5N1 327 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 NEO1Q92859 1461 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 MYO1BO43795 1136 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 MTHFSDQ2M296 383 aaKnown RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 UTP14AQ9BVJ6 771 aaKnown RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 WWC3Q9ULE0 1092 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 ME1P48163 572 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 TTF1Q15361 905 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 SPTY2D1Q68D10 685 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 NYXQ9GZU5 481 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 TSPOAP1O95153 1857 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 MATR3P43243 847 aaKnown RBP eCLIP8.44□□□□□ -1.06
KDM3B-207ENST00000510866 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 GSE1Q14687 1217 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 NLRP3Q96P20 1036 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
KDM3B-207ENST00000510866 PRPF40AO75400 957 aaKnown RBP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 LDHCP07864 332 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 TRIM27P14373 513 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 SLC4A8Q2Y0W8 1093 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 POLKQ9UBT6 870 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 IL16Q14005 1332 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 GOLIM4O00461 696 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 ZNF213O14771 459 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 LETM1O95202 739 aaPredicted RBP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 BAG3O95817 575 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 SNRKQ9NRH2 765 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 IP6K1Q92551 441 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
KDM3B-207ENST00000510866 A0A1W2PP64 1363 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 TNIP1Q15025 636 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 FILIP1LQ4L180 1135 aa8.43□□□□□ -1.06
KDM3B-207ENST00000510866 SMC2O95347 1197 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 SYCP1Q15431 976 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 DDX11Q96FC9 970 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 FEZ1Q99689 392 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 MAP3K5Q99683 1374 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 IQCA1Q86XH1 822 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
KDM3B-207ENST00000510866 MYCNP04198 464 aaPredicted RBP8.42□□□□□ -1.06
KDM3B-207ENST00000510866 GSTO1P78417 241 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 C20orf194Q5TEA3 1177 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 DCAF5Q96JK2 942 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 HLA-DOAP06340 250 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 STIM1Q13586 685 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 RNF41Q9H4P4 317 aaPredicted RBP8.42□□□□□ -1.06
KDM3B-207ENST00000510866 F8W031 263 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms