RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
MBD4-208ENST00000509828 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
MBD4-208ENST00000509828 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
MBD4-208ENST00000509828 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
MBD4-208ENST00000509828 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
MBD4-208ENST00000509828 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
MBD4-208ENST00000509828 SLC39A6Q13433 755 aa14.08□□□□□ -0.16
MBD4-208ENST00000509828 NPM2Q86SE8 214 aaKnown RBP14.08□□□□□ -0.16
MBD4-208ENST00000509828 ZNF622Q969S3 477 aaKnown RBP eCLIP14.08□□□□□ -0.161e-6■■■■□ 19.4
MBD4-208ENST00000509828 LGR6Q9HBX8 967 aa14.08□□□□□ -0.16
MBD4-208ENST00000509828 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
MBD4-208ENST00000509828 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
MBD4-208ENST00000509828 HSPA1AP0DMV8 641 aaKnown RBP14.07□□□□□ -0.16
MBD4-208ENST00000509828 HSPA1BP0DMV9 641 aaKnown RBP14.07□□□□□ -0.16
MBD4-208ENST00000509828 PRELPP51888 382 aa14.07□□□□□ -0.16
MBD4-208ENST00000509828 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
MBD4-208ENST00000509828 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
MBD4-208ENST00000509828 A0A087WZG4 1122 aa14.06□□□□□ -0.16
MBD4-208ENST00000509828 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
MBD4-208ENST00000509828 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
MBD4-208ENST00000509828 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
MBD4-208ENST00000509828 RNMTO43148 476 aaKnown RBP14.05□□□□□ -0.16
MBD4-208ENST00000509828 STARD3NLO95772 234 aa14.05□□□□□ -0.16
MBD4-208ENST00000509828 HMOX1P09601 288 aa14.05□□□□□ -0.16
MBD4-208ENST00000509828 IL13P35225 146 aa14.05□□□□□ -0.16
MBD4-208ENST00000509828 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
MBD4-208ENST00000509828 ZBTB1Q9Y2K1 713 aa14.05□□□□□ -0.16
MBD4-208ENST00000509828 COL15A1P39059 1388 aa14.05□□□□□ -0.16
MBD4-208ENST00000509828 MYH14Q7Z406 1995 aaKnown RBP14.04□□□□□ -0.16
MBD4-208ENST00000509828 HSPA5P11021 654 aaKnown RBP14.04□□□□□ -0.16
MBD4-208ENST00000509828 PDE6BP35913 854 aa14.04□□□□□ -0.16
MBD4-208ENST00000509828 ERFEQ4G0M1 354 aa14.04□□□□□ -0.16
MBD4-208ENST00000509828 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
MBD4-208ENST00000509828 C21orf2O43822 256 aa14.03□□□□□ -0.16
MBD4-208ENST00000509828 PDZRN3Q9UPQ7 1066 aa14.03□□□□□ -0.16
MBD4-208ENST00000509828 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
MBD4-208ENST00000509828 BRCA1P38398 1863 aaKnown RBP14.02□□□□□ -0.16
MBD4-208ENST00000509828 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
MBD4-208ENST00000509828 NFKBIEO00221 500 aa14.01□□□□□ -0.17
MBD4-208ENST00000509828 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
MBD4-208ENST00000509828 CCDC24Q8N4L8 307 aa14.01□□□□□ -0.17
MBD4-208ENST00000509828 BRIP1Q9BX63 1249 aa14.01□□□□□ -0.17
MBD4-208ENST00000509828 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
MBD4-208ENST00000509828 MKRN1Q9UHC7 482 aaKnown RBP14.01□□□□□ -0.17
MBD4-208ENST00000509828 TEFQ10587 303 aa14□□□□□ -0.17
MBD4-208ENST00000509828 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
MBD4-208ENST00000509828 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
MBD4-208ENST00000509828 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
MBD4-208ENST00000509828 TJP1Q07157 1748 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
MBD4-208ENST00000509828 ST5P78524 1137 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 TBC1D9BQ66K14 1250 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 CNKSR1Q969H4 720 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
MBD4-208ENST00000509828 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
MBD4-208ENST00000509828 SOGA3Q5TF21 947 aa13.98□□□□□ -0.17
MBD4-208ENST00000509828 CNBD1Q8NA66 436 aa13.98□□□□□ -0.17
MBD4-208ENST00000509828 AIDAQ96BJ3 306 aa13.98□□□□□ -0.17
MBD4-208ENST00000509828 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
MBD4-208ENST00000509828 CARMIL3Q8ND23 1372 aa13.97□□□□□ -0.17
MBD4-208ENST00000509828 POTECB2RU33 542 aa13.97□□□□□ -0.17
MBD4-208ENST00000509828 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
MBD4-208ENST00000509828 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
MBD4-208ENST00000509828 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
MBD4-208ENST00000509828 SBF1O95248 1867 aa13.97□□□□□ -0.17
MBD4-208ENST00000509828 IQCA1LA6NCM1 817 aa13.96□□□□□ -0.17
MBD4-208ENST00000509828 U2SURPO15042 1029 aaKnown RBP13.96□□□□□ -0.17
MBD4-208ENST00000509828 PRR5LQ6MZQ0 368 aa13.96□□□□□ -0.17
MBD4-208ENST00000509828 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
MBD4-208ENST00000509828 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
MBD4-208ENST00000509828 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
MBD4-208ENST00000509828 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
MBD4-208ENST00000509828 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
MBD4-208ENST00000509828 IL6STP40189 918 aaPredicted RBP13.94□□□□□ -0.18
MBD4-208ENST00000509828 EAPPQ56P03 285 aaPredicted RBP13.94□□□□□ -0.18
MBD4-208ENST00000509828 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
MBD4-208ENST00000509828 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
MBD4-208ENST00000509828 ZNF790Q6PG37 636 aa13.94□□□□□ -0.18
MBD4-208ENST00000509828 MASTLQ96GX5 879 aa13.94□□□□□ -0.18
MBD4-208ENST00000509828 A1BGP04217 495 aa13.93□□□□□ -0.18
MBD4-208ENST00000509828 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
MBD4-208ENST00000509828 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
MBD4-208ENST00000509828 DZIP3Q86Y13 1208 aaKnown RBP13.93□□□□□ -0.18
MBD4-208ENST00000509828 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
MBD4-208ENST00000509828 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 LTBP3Q9NS15 1303 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
MBD4-208ENST00000509828 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 SRGNP10124 158 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
MBD4-208ENST00000509828 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
MBD4-208ENST00000509828 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
MBD4-208ENST00000509828 TMEM88BA6NKF7 163 aa13.91□□□□□ -0.18
MBD4-208ENST00000509828 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
MBD4-208ENST00000509828 FOXN1O15353 648 aa13.91□□□□□ -0.18
MBD4-208ENST00000509828 GTF2E1P29083 439 aaPredicted RBP13.91□□□□□ -0.18
MBD4-208ENST00000509828 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
MBD4-208ENST00000509828 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms