RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
CCSER1-209ENST00000509176 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
CCSER1-209ENST00000509176 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 CKAP2LQ8IYA6 745 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 DAPK1P53355 1430 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 SLC12A7Q9Y666 1083 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
CCSER1-209ENST00000509176 RNF41Q9H4P4 317 aaPredicted RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
CCSER1-209ENST00000509176 CCDC196A0A1B0GTZ2 297 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 NLRP5P59047 1200 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 RPAP2Q8IXW5 612 aaPredicted RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 KRT85P78386 507 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 TNMDQ9H2S6 317 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 NFKBIBQ15653 356 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 ZRSR2Q15696 482 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 CCDC194A0A1B0GVG4 234 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
CCSER1-209ENST00000509176 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
CCSER1-209ENST00000509176 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
CCSER1-209ENST00000509176 GLRX3O76003 335 aaKnown RBP12.86□□□□□ -0.35
CCSER1-209ENST00000509176 PDE4BQ07343 736 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 GSTO1P78417 241 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 ANAPC15P60006 121 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 ADGRF5Q8IZF2 1346 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
CCSER1-209ENST00000509176 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
CCSER1-209ENST00000509176 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 TMEM57Q8N5G2 664 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 GSE1Q14687 1217 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 ANXA1P04083 346 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
CCSER1-209ENST00000509176 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
CCSER1-209ENST00000509176 GOLIM4O00461 696 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 GPR162Q16538 588 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
CCSER1-209ENST00000509176 PSMD1Q99460 953 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 FANCAO15360 1455 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
CCSER1-209ENST00000509176 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
CCSER1-209ENST00000509176 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 MBD3O95983 291 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 IL2RBP14784 551 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 MX1P20591 662 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
CCSER1-209ENST00000509176 TSG101Q99816 390 aa12.84□□□□□ -0.35
CCSER1-209ENST00000509176 CETN2P41208 172 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 FAM177A1Q8N128 213 aaPredicted RBP12.83□□□□□ -0.36
CCSER1-209ENST00000509176 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
CCSER1-209ENST00000509176 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
CCSER1-209ENST00000509176 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 FERMT2Q96AC1 680 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 GNPATO15228 680 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
CCSER1-209ENST00000509176 BICD1Q96G01 975 aa12.83□□□□□ -0.36
CCSER1-209ENST00000509176 GUCY1B3Q02153 619 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
CCSER1-209ENST00000509176 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 TAX1BP1Q86VP1 789 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
CCSER1-209ENST00000509176 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms