RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
SNCA-210ENST00000506691 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
SNCA-210ENST00000506691 SBF1O95248 1867 aa14.34□□□□□ -0.11
SNCA-210ENST00000506691 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
SNCA-210ENST00000506691 HMOX1P09601 288 aa14.34□□□□□ -0.11
SNCA-210ENST00000506691 RSPH6AQ9H0K4 717 aa14.34□□□□□ -0.11
SNCA-210ENST00000506691 AEBP1Q8IUX7 1158 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 MIER1Q8N108 512 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 SMC1BQ8NDV3 1235 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 GAS2L2Q8NHY3 880 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
SNCA-210ENST00000506691 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 ADAMTS8Q9UP79 889 aa14.33□□□□□ -0.12
SNCA-210ENST00000506691 TM4SF1P30408 202 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 PRKAR2BP31323 418 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 CABP4P57796 275 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 TJP1Q07157 1748 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 NRXN2Q9P2S2 1712 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 DLEC1Q9Y238 1755 aa14.32□□□□□ -0.12
SNCA-210ENST00000506691 CRKLP46109 303 aaKnown RBP14.31□□□□□ -0.12
SNCA-210ENST00000506691 C1orf141Q5JVX7 400 aa14.31□□□□□ -0.12
SNCA-210ENST00000506691 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
SNCA-210ENST00000506691 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
SNCA-210ENST00000506691 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
SNCA-210ENST00000506691 KCPQ6ZWJ8 1503 aa14.31□□□□□ -0.12
SNCA-210ENST00000506691 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
SNCA-210ENST00000506691 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
SNCA-210ENST00000506691 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
SNCA-210ENST00000506691 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
SNCA-210ENST00000506691 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
SNCA-210ENST00000506691 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
SNCA-210ENST00000506691 MRC1P22897 1456 aa14.3□□□□□ -0.12
SNCA-210ENST00000506691 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
SNCA-210ENST00000506691 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
SNCA-210ENST00000506691 DDR1Q08345 913 aa14.29□□□□□ -0.12
SNCA-210ENST00000506691 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
SNCA-210ENST00000506691 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
SNCA-210ENST00000506691 VEGFAP15692 232 aaPredicted RBP14.28□□□□□ -0.12
SNCA-210ENST00000506691 LMNB1P20700 586 aa14.28□□□□□ -0.12
SNCA-210ENST00000506691 FKBP8Q14318 412 aa14.28□□□□□ -0.12
SNCA-210ENST00000506691 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
SNCA-210ENST00000506691 ZPR1O75312 459 aa14.27□□□□□ -0.13
SNCA-210ENST00000506691 MTHFSDQ2M296 383 aaKnown RBP14.27□□□□□ -0.13
SNCA-210ENST00000506691 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
SNCA-210ENST00000506691 VSIG10Q8N0Z9 540 aa14.27□□□□□ -0.13
SNCA-210ENST00000506691 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.13
SNCA-210ENST00000506691 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
SNCA-210ENST00000506691 GNAT3A8MTJ3 354 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 PRELPP51888 382 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
SNCA-210ENST00000506691 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
SNCA-210ENST00000506691 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
SNCA-210ENST00000506691 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
SNCA-210ENST00000506691 RRAGCQ9HB90 399 aa14.25□□□□□ -0.13
SNCA-210ENST00000506691 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
SNCA-210ENST00000506691 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
SNCA-210ENST00000506691 COL13A1Q5TAT6 717 aaPredicted RBP14.24□□□□□ -0.13
SNCA-210ENST00000506691 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
SNCA-210ENST00000506691 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
SNCA-210ENST00000506691 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
SNCA-210ENST00000506691 TIAM2Q8IVF5 1701 aa14.23□□□□□ -0.13
SNCA-210ENST00000506691 COL15A1P39059 1388 aa14.22□□□□□ -0.13
SNCA-210ENST00000506691 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
SNCA-210ENST00000506691 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
SNCA-210ENST00000506691 CHRNA5P30532 468 aa14.22□□□□□ -0.13
SNCA-210ENST00000506691 RIPK4P57078 832 aa14.22□□□□□ -0.13
SNCA-210ENST00000506691 TNS4Q8IZW8 715 aa14.22□□□□□ -0.13
SNCA-210ENST00000506691 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
SNCA-210ENST00000506691 LTBP3Q9NS15 1303 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 NFIXQ14938 502 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
SNCA-210ENST00000506691 A0A087WZG4 1122 aa14.2□□□□□ -0.14
SNCA-210ENST00000506691 H0YIN7 160 aa14.2□□□□□ -0.14
SNCA-210ENST00000506691 APAF1O14727 1248 aa14.2□□□□□ -0.14
SNCA-210ENST00000506691 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
SNCA-210ENST00000506691 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
SNCA-210ENST00000506691 PCNTO95613 3336 aa14.2□□□□□ -0.14
SNCA-210ENST00000506691 SERPINB2P05120 415 aa14.19□□□□□ -0.14
SNCA-210ENST00000506691 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
SNCA-210ENST00000506691 TEX13AQ9BXU3 409 aaPredicted RBP14.19□□□□□ -0.14
SNCA-210ENST00000506691 FER1L6Q2WGJ9 1857 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 PDE6BP35913 854 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 TEFQ10587 303 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 BRIP1Q9BX63 1249 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 CEMIPQ8WUJ3 1361 aa14.18□□□□□ -0.14
SNCA-210ENST00000506691 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
SNCA-210ENST00000506691 NFKBIEO00221 500 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 RGL2O15211 777 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 STARD3NLO95772 234 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 EIF5P55010 431 aaKnown RBP14.17□□□□□ -0.14
SNCA-210ENST00000506691 HTRA3P83110 453 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms