RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 N4BP2Q86UW6 1770 aaPredicted RBP15.18■□□□□ 0.02
LIN54-206ENST00000506560 EVA1CP58658 441 aa15.18■□□□□ 0.02
LIN54-206ENST00000506560 ATP8B2P98198 1209 aa15.18■□□□□ 0.02
LIN54-206ENST00000506560 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
LIN54-206ENST00000506560 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
LIN54-206ENST00000506560 CABP4P57796 275 aa15.18■□□□□ 0.02
LIN54-206ENST00000506560 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
LIN54-206ENST00000506560 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
LIN54-206ENST00000506560 ROBO1Q9Y6N7 1651 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 HMMRO75330 724 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 IL2RBP14784 551 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 CARD10Q9BWT7 1032 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 DDX21Q9NR30 783 aaKnown RBP eCLIP15.16■□□□□ 0.02
LIN54-206ENST00000506560 MRC1P22897 1456 aa15.16■□□□□ 0.02
LIN54-206ENST00000506560 TTC22Q5TAA0 569 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 KSR2Q6VAB6 950 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 TTC5Q8N0Z6 440 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 KAT6BQ8WYB5 2073 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 SHANK3Q9BYB0 1731 aa15.15■□□□□ 0.02
LIN54-206ENST00000506560 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
LIN54-206ENST00000506560 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
LIN54-206ENST00000506560 GLI3P10071 1580 aa15.14■□□□□ 0.01
LIN54-206ENST00000506560 HYPKQ9NX55 129 aa15.13■□□□□ 0.01
LIN54-206ENST00000506560 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
LIN54-206ENST00000506560 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
LIN54-206ENST00000506560 SRGAP3O43295 1099 aa15.13■□□□□ 0.01
LIN54-206ENST00000506560 IGKV5-2P06315 115 aa15.13■□□□□ 0.01
LIN54-206ENST00000506560 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
LIN54-206ENST00000506560 SDSP20132 328 aa15.12■□□□□ 0.01
LIN54-206ENST00000506560 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
LIN54-206ENST00000506560 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
LIN54-206ENST00000506560 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
LIN54-206ENST00000506560 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
LIN54-206ENST00000506560 LTBP4Q8N2S1 1624 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 PDE1AP54750 535 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 KAZALD1Q96I82 304 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 LRRCC1Q9C099 1032 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 SURF6O75683 361 aaKnown RBP15.11■□□□□ 0.01
LIN54-206ENST00000506560 POLA2Q14181 598 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
LIN54-206ENST00000506560 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
LIN54-206ENST00000506560 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
LIN54-206ENST00000506560 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 NBPF26B4DH59 902 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 NBPF10Q6P3W6 841 aaKnown RBP15.1■□□□□ 0.01
LIN54-206ENST00000506560 NBPF15Q8N660 670 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 PA2G4Q9UQ80 394 aaKnown RBP15.1■□□□□ 0.01
LIN54-206ENST00000506560 SPRYD3Q8NCJ5 442 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
LIN54-206ENST00000506560 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 MYD88Q99836 296 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 CDC45O75419 566 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 A1BGP04217 495 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
LIN54-206ENST00000506560 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0.01
LIN54-206ENST00000506560 LINS1Q8NG48 757 aa15.08■□□□□ 0.01
LIN54-206ENST00000506560 CHMP4AQ9BY43 222 aa15.08■□□□□ 0.01
LIN54-206ENST00000506560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.08■□□□□ 0.01
LIN54-206ENST00000506560 COL16A1Q07092 1604 aaPredicted RBP15.08■□□□□ 0
LIN54-206ENST00000506560 ATP5J2-PTCD1G3V325 749 aa15.08■□□□□ 0
LIN54-206ENST00000506560 SLKQ9H2G2 1235 aaPredicted RBP15.08■□□□□ 0
LIN54-206ENST00000506560 ALDH1L1O75891 902 aa15.07■□□□□ 0
LIN54-206ENST00000506560 KIF2CQ99661 725 aa15.07■□□□□ 0
LIN54-206ENST00000506560 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
LIN54-206ENST00000506560 GRM8O00222 908 aa15.07■□□□□ 0
LIN54-206ENST00000506560 DEKP35659 375 aaKnown RBP15.07■□□□□ 0
LIN54-206ENST00000506560 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
LIN54-206ENST00000506560 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
LIN54-206ENST00000506560 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
LIN54-206ENST00000506560 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
LIN54-206ENST00000506560 NEURL1BA8MQ27 555 aa15.07■□□□□ 0
LIN54-206ENST00000506560 ERVV-2B6SEH9 535 aa15.07■□□□□ 0
LIN54-206ENST00000506560 DDX58O95786 925 aaKnown RBP15.07■□□□□ 0
LIN54-206ENST00000506560 TTLL7Q6ZT98 887 aa15.07■□□□□ 0
LIN54-206ENST00000506560 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
LIN54-206ENST00000506560 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
LIN54-206ENST00000506560 KCPQ6ZWJ8 1503 aa15.06■□□□□ 0
LIN54-206ENST00000506560 MX1P20591 662 aa15.06■□□□□ 0
LIN54-206ENST00000506560 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
LIN54-206ENST00000506560 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
LIN54-206ENST00000506560 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
LIN54-206ENST00000506560 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
LIN54-206ENST00000506560 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
LIN54-206ENST00000506560 MAP4K4O95819 1239 aaPredicted RBP15.05■□□□□ 0
LIN54-206ENST00000506560 RBM25P49756 843 aaKnown RBP15.05■□□□□ 0
LIN54-206ENST00000506560 PIGBQ92521 554 aa15.05■□□□□ 0
LIN54-206ENST00000506560 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ 0
LIN54-206ENST00000506560 CD2BP2O95400 341 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms