RNA–Protein interactions for RNA: ENST00000505280.1

SEC24D-207, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-207ENST00000505280 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
SEC24D-207ENST00000505280 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEC24D-207ENST00000505280 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
SEC24D-207ENST00000505280 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
SEC24D-207ENST00000505280 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
SEC24D-207ENST00000505280 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
SEC24D-207ENST00000505280 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
SEC24D-207ENST00000505280 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
SEC24D-207ENST00000505280 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
SEC24D-207ENST00000505280 PAXIP1Q6ZW49 1069 aaPredicted RBP13.6□□□□□ -0.23
SEC24D-207ENST00000505280 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
SEC24D-207ENST00000505280 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
SEC24D-207ENST00000505280 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
SEC24D-207ENST00000505280 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
SEC24D-207ENST00000505280 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
SEC24D-207ENST00000505280 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
SEC24D-207ENST00000505280 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
SEC24D-207ENST00000505280 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
SEC24D-207ENST00000505280 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
SEC24D-207ENST00000505280 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
SEC24D-207ENST00000505280 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
SEC24D-207ENST00000505280 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
SEC24D-207ENST00000505280 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
SEC24D-207ENST00000505280 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
SEC24D-207ENST00000505280 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
SEC24D-207ENST00000505280 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
SEC24D-207ENST00000505280 BTAF1O14981 1849 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 SOCS7O14512 581 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 NEFMP07197 916 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
SEC24D-207ENST00000505280 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
SEC24D-207ENST00000505280 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
SEC24D-207ENST00000505280 APAF1O14727 1248 aa13.56□□□□□ -0.24
SEC24D-207ENST00000505280 MCM10Q7L590 875 aa13.56□□□□□ -0.24
SEC24D-207ENST00000505280 PIGBQ92521 554 aa13.56□□□□□ -0.24
SEC24D-207ENST00000505280 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
SEC24D-207ENST00000505280 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
SEC24D-207ENST00000505280 APBA3O96018 575 aa13.55□□□□□ -0.24
SEC24D-207ENST00000505280 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
SEC24D-207ENST00000505280 ITGB4P16144 1822 aa13.55□□□□□ -0.24
SEC24D-207ENST00000505280 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 RIPK4P57078 832 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 CABP4P57796 275 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
SEC24D-207ENST00000505280 RGPD3A6NKT7 1758 aaPredicted RBP13.53□□□□□ -0.24
SEC24D-207ENST00000505280 RGPD4Q7Z3J3 1758 aa13.53□□□□□ -0.24
SEC24D-207ENST00000505280 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
SEC24D-207ENST00000505280 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
SEC24D-207ENST00000505280 RREB1Q92766 1687 aa13.53□□□□□ -0.24
SEC24D-207ENST00000505280 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
SEC24D-207ENST00000505280 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
SEC24D-207ENST00000505280 BAG6P46379 1132 aa13.52□□□□□ -0.25
SEC24D-207ENST00000505280 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
SEC24D-207ENST00000505280 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
SEC24D-207ENST00000505280 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.25
SEC24D-207ENST00000505280 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
SEC24D-207ENST00000505280 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
SEC24D-207ENST00000505280 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
SEC24D-207ENST00000505280 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
SEC24D-207ENST00000505280 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
SEC24D-207ENST00000505280 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
SEC24D-207ENST00000505280 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
SEC24D-207ENST00000505280 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
SEC24D-207ENST00000505280 TEFQ10587 303 aa13.5□□□□□ -0.25
SEC24D-207ENST00000505280 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
SEC24D-207ENST00000505280 LY75O60449 1722 aa13.5□□□□□ -0.25
SEC24D-207ENST00000505280 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
SEC24D-207ENST00000505280 PLSCR1O15162 318 aa13.49□□□□□ -0.25
SEC24D-207ENST00000505280 KCNQ3O43525 872 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 KCNQ4P56696 695 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
SEC24D-207ENST00000505280 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
SEC24D-207ENST00000505280 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
SEC24D-207ENST00000505280 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
SEC24D-207ENST00000505280 TJP1Q07157 1748 aa13.47□□□□□ -0.25
SEC24D-207ENST00000505280 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.25
SEC24D-207ENST00000505280 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
SEC24D-207ENST00000505280 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
SEC24D-207ENST00000505280 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
SEC24D-207ENST00000505280 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
SEC24D-207ENST00000505280 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
SEC24D-207ENST00000505280 PTCD1O75127 700 aaKnown RBP13.45□□□□□ -0.26
SEC24D-207ENST00000505280 SIK1P57059 783 aa13.45□□□□□ -0.26
SEC24D-207ENST00000505280 ITPK1Q13572 414 aa13.45□□□□□ -0.26
SEC24D-207ENST00000505280 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
SEC24D-207ENST00000505280 WWC1Q8IX03 1113 aa13.45□□□□□ -0.26
SEC24D-207ENST00000505280 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
SEC24D-207ENST00000505280 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
SEC24D-207ENST00000505280 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
SEC24D-207ENST00000505280 C5P01031 1676 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms