RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 SERPINB2P05120 415 aa12.53□□□□□ -0.4
PDGFC-204ENST00000504672 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
PDGFC-204ENST00000504672 LBX1P52954 281 aa12.53□□□□□ -0.4
PDGFC-204ENST00000504672 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
PDGFC-204ENST00000504672 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
PDGFC-204ENST00000504672 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
PDGFC-204ENST00000504672 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
PDGFC-204ENST00000504672 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 H0YIN7 160 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 C21orf2O43822 256 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
PDGFC-204ENST00000504672 CTCFP49711 727 aaPredicted RBP12.52□□□□□ -0.41
PDGFC-204ENST00000504672 VEGFBP49765 207 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 ERFEQ4G0M1 354 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
PDGFC-204ENST00000504672 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
PDGFC-204ENST00000504672 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDGFC-204ENST00000504672 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
PDGFC-204ENST00000504672 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
PDGFC-204ENST00000504672 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
PDGFC-204ENST00000504672 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
PDGFC-204ENST00000504672 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
PDGFC-204ENST00000504672 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
PDGFC-204ENST00000504672 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
PDGFC-204ENST00000504672 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
PDGFC-204ENST00000504672 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
PDGFC-204ENST00000504672 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
PDGFC-204ENST00000504672 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
PDGFC-204ENST00000504672 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
PDGFC-204ENST00000504672 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
PDGFC-204ENST00000504672 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
PDGFC-204ENST00000504672 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
PDGFC-204ENST00000504672 MYH14Q7Z406 1995 aaKnown RBP12.48□□□□□ -0.41
PDGFC-204ENST00000504672 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
PDGFC-204ENST00000504672 SBF1O95248 1867 aa12.47□□□□□ -0.41
PDGFC-204ENST00000504672 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
PDGFC-204ENST00000504672 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
PDGFC-204ENST00000504672 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
PDGFC-204ENST00000504672 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
PDGFC-204ENST00000504672 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
PDGFC-204ENST00000504672 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
PDGFC-204ENST00000504672 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.41
PDGFC-204ENST00000504672 PASKQ96RG2 1323 aa12.45□□□□□ -0.42
PDGFC-204ENST00000504672 TMEM88BA6NKF7 163 aa12.45□□□□□ -0.42
PDGFC-204ENST00000504672 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
PDGFC-204ENST00000504672 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
PDGFC-204ENST00000504672 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
PDGFC-204ENST00000504672 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
PDGFC-204ENST00000504672 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
PDGFC-204ENST00000504672 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
PDGFC-204ENST00000504672 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
PDGFC-204ENST00000504672 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
PDGFC-204ENST00000504672 DEFB115Q30KQ5 88 aa12.43□□□□□ -0.42
PDGFC-204ENST00000504672 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
PDGFC-204ENST00000504672 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
PDGFC-204ENST00000504672 COL15A1P39059 1388 aa12.43□□□□□ -0.42
PDGFC-204ENST00000504672 PDE6BP35913 854 aa12.42□□□□□ -0.42
PDGFC-204ENST00000504672 MAP1SQ66K74 1059 aaPredicted RBP12.42□□□□□ -0.42
PDGFC-204ENST00000504672 SLC52A2Q9HAB3 445 aa12.42□□□□□ -0.42
PDGFC-204ENST00000504672 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
PDGFC-204ENST00000504672 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
PDGFC-204ENST00000504672 GRM1Q13255 1194 aa12.41□□□□□ -0.42
PDGFC-204ENST00000504672 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
PDGFC-204ENST00000504672 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
PDGFC-204ENST00000504672 WDR33Q9C0J8 1336 aaKnown RBP12.4□□□□□ -0.42
PDGFC-204ENST00000504672 KIF20BQ96Q89 1820 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 IQCA1LA6NCM1 817 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 FMR1Q06787 632 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDGFC-204ENST00000504672 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
PDGFC-204ENST00000504672 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 ABT1Q9ULW3 272 aaKnown RBP12.4□□□□□ -0.42
PDGFC-204ENST00000504672 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
PDGFC-204ENST00000504672 NPHP1O15259 732 aa12.39□□□□□ -0.43
PDGFC-204ENST00000504672 RNMTO43148 476 aaKnown RBP12.39□□□□□ -0.43
PDGFC-204ENST00000504672 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
PDGFC-204ENST00000504672 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
PDGFC-204ENST00000504672 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 EPHX2P34913 555 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-204ENST00000504672 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-204ENST00000504672 CNKSR1Q969H4 720 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-204ENST00000504672 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
PDGFC-204ENST00000504672 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 TJP1Q07157 1748 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 STARD3NLO95772 234 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 SRGNP10124 158 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
PDGFC-204ENST00000504672 A0A087WZG4 1122 aa12.36□□□□□ -0.43
PDGFC-204ENST00000504672 HMOX1P09601 288 aa12.36□□□□□ -0.43
PDGFC-204ENST00000504672 IL13P35225 146 aa12.36□□□□□ -0.43
PDGFC-204ENST00000504672 RGS19P49795 217 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms