RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 EXOC5O00471 708 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 ZNF213O14771 459 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 KRT28Q7Z3Y7 464 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 FKBP15Q5T1M5 1219 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 GOLGA8BA8MQT2 603 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 MAP3K2Q9Y2U5 619 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 F6X3S4 739 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 NCOA1Q15788 1441 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 KIAA0754O94854 1291 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 GPTP24298 496 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 RBM10P98175 930 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC150Q8NCX0 1101 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 PLEKHH1Q9ULM0 1364 aa8.36□□□□□ -1.07
SYNPO2-205ENST00000504178 ABCA10Q8WWZ4 1543 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 NLRP5P59047 1200 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 IQCA1Q86XH1 822 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 C8orf76Q96K31 380 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 NOS1P29475 1434 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 PLB1Q6P1J6 1458 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC66A2RUB6 948 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 SPA17Q15506 151 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 WDR78Q5VTH9 848 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 CATIPQ7Z7H3 387 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 ABCC5O15440 1437 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 PTPRCP08575 1304 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 A0A087WZG4 1122 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 ST5P78524 1137 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 TTF1Q15361 905 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 BAG4O95429 457 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 GUCY1B3Q02153 619 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
SYNPO2-205ENST00000504178 MYCNP04198 464 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 EZRP15311 586 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 PLCD4Q9BRC7 762 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 RAB34Q9BZG1 259 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 LIG1P18858 919 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 CWC25Q9NXE8 425 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 FOXO3O43524 673 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 CETN2P41208 172 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 RARSP54136 660 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 ARHGAP29Q52LW3 1261 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 FERMT3Q86UX7 667 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 TEX13AQ9BXU3 409 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 DBF4Q9UBU7 674 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 SYCE3A1L190 88 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 CASQ1P31415 396 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 KLHL10Q6JEL2 608 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 GRIN2AQ12879 1464 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 ADGRF5Q8IZF2 1346 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 DENND4BO75064 1496 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 GOLGA6L7A0A1B0GV03 622 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 DDX46Q7L014 1031 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 CACNA2D4Q7Z3S7 1137 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 PPP1R42Q7Z4L9 355 aa8.34□□□□□ -1.07
SYNPO2-205ENST00000504178 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 UQCRHLA0A096LP55 91 aa8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC194A0A1B0GVG4 234 aa8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 UQCRHP07919 91 aa8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 CEBPAP49715 358 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 CDC5LQ99459 802 aaKnown RBP8.34□□□□□ -1.08
SYNPO2-205ENST00000504178 IFNL2Q8IZJ0 200 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 EVI5LQ96CN4 794 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 ANO10Q9NW15 660 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 SLC4A8Q2Y0W8 1093 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 NSD2O96028 1365 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 SPDYE4A6NLX3 237 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 RFC4P35249 363 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 ANAPC15P60006 121 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC178Q5BJE1 867 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC183Q5T5S1 534 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 KAT14Q9H8E8 782 aa8.33□□□□□ -1.08
SYNPO2-205ENST00000504178 PIK3R4Q99570 1358 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 GOLIM4O00461 696 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC102AQ96A19 550 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 FANCAO15360 1455 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms